Query= MSMg01no121_b11.b1 MSMg01no121_b11.b1 CHROMAT_FILE:
MSMg01no121_b11.b1 PHD_FILE: MSMg01no121_b11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:28:45 2005
(110 letters)
>mm_chr1_150812180_150812689
Length = 510
Score = 176 bits (91), Expect = 3e-49
Identities = 106/111 (95%), Gaps = 2/111 (1%)
Strand = Plus / Minus
Query: 1 tgatctaaaagcatacaa-catttttaaacctatccaattatgaaaatcccaagtagcaa 59
||||||||||| ||| || |||||||||||||||| ||||||||||||||||||||||||
Sbjct: 310 tgatctaaaagaata-aaccatttttaaacctatcaaattatgaaaatcccaagtagcaa 252
Query: 60 attttaagtcatatttgttttattttctgaatattcatacatttatagact 110
||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 attttaagttatatttgttttattttctgaatattcatacatttatagact 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 3
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 110
Length of database: 510
Length adjustment: 8
Effective length of query: 102
Effective length of database: 502
Effective search space: 51204
Effective search space used: 51204
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
| Query= MSMg01no121_b11.g1 MSMg01no121_b11.g1 CHROMAT_FILE:
MSMg01no121_b11.g1 PHD_FILE: MSMg01no121_b11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:28:45 2005
(191 letters)
>mm_chr1_150712065_150712656
Length = 592
Score = 333 bits (172), Expect = 5e-96
Identities = 187/192 (97%), Gaps = 1/192 (0%)
Strand = Plus / Plus
Query: 1 aatgcctcatttacaacctcacaagctaacgttcacttttaataacccccagcacttcct 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 aatgcctcatttacaacctcacaagctaacgttcacttttaataacctaaagcacttcct 260
Query: 61 cagacaggaccaaggcagaaaactgataacagtctcaaaaaggggttaacagacatttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagacaggaccaaggcagaaaactgataacagtctcaaaaaggggttaacagacatttaa 320
Query: 121 acat-ttaaaagaaattgtgacaaagaaattcctagtagaggtatcagcaatttacacaa 179
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acagattaaaagaaattgtgacaaagaaattcctagtagaggtatcagcaatttacacaa 380
Query: 180 atatatgggata 191
||||||||||||
Sbjct: 381 atatatgggata 392
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 191
Length of database: 592
Length adjustment: 8
Effective length of query: 183
Effective length of database: 584
Effective search space: 106872
Effective search space used: 106872
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
