Query= MSMg01no121_c12.b1 MSMg01no121_c12.b1 CHROMAT_FILE:
MSMg01no121_c12.b1 PHD_FILE: MSMg01no121_c12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:28:50 2005
(293 letters)
>mm_chr1_150812111_150812803
Length = 693
Score = 466 bits (241), Expect = e-136
Identities = 280/293 (95%)
Strand = Plus / Minus
Query: 1 aatcatttgacatgagtattgatctaaaagcataaaacatttttaaacctaccaaattat 60
||||||||| |||||||||||||||||||| ||||| |||||||||||||| ||||||||
Sbjct: 398 aatcatttgccatgagtattgatctaaaagaataaaccatttttaaacctatcaaattat 339
Query: 61 gaaaatcccaagtagcaaattttaagtcatatttgttttattttctgaatattcatacat 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 338 gaaaatcccaagtagcaaattttaagttatatttgttttattttctgaatattcatacat 279
Query: 121 ttatagactaacttagtgcaatcagggtattggttaggagcatccactggaacatgggca 180
|||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 278 ttatagactaacttagtgcaatcagggtattggttaggagtatccactgtaacatgggca 219
Query: 181 tcttacctattaagagtttattattattatcatgaacatcatcatcatgatcatcattat 240
||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct: 218 tcttatctattaagagttcattattattatcatgaccatcatcatcatgatcatcattat 159
Query: 241 tatcatcatcagatacatataagtcagggatgatgatgcctgtattgatatgt 293
||||||||||||| ||||||||||||||||||||||||||| |||||| ||||
Sbjct: 158 tatcatcatcagaaacatataagtcagggatgatgatgcctatattgaaatgt 106
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no121_c12.g1 MSMg01no121_c12.g1 CHROMAT_FILE:
MSMg01no121_c12.g1 PHD_FILE: MSMg01no121_c12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:28:50 2005
(576 letters)
>mm_chr1_150712065_150713039
Length = 975
Score = 1011 bits (523), Expect = 0.0
Identities = 563/577 (97%), Gaps = 3/577 (0%)
Strand = Plus / Plus
Query: 1 aatgcctcatttacaacctcacaagctaacgttcacttttaataacctcaagcacttcct 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 aatgcctcatttacaacctcacaagctaacgttcacttttaataacctaaagcacttcct 260
Query: 61 cagacaggaccaaggcagaaaactgataacagtctcaaaaaggggttaacagacatttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagacaggaccaaggcagaaaactgataacagtctcaaaaaggggttaacagacatttaa 320
Query: 121 acat-ttaaaagaaattgtgacaaagaaattcctagtagaggtatcagcaatttacacaa 179
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acagattaaaagaaattgtgacaaagaaattcctagtagaggtatcagcaatttacacaa 380
Query: 180 atatatgggatacatttaacaattgcagtaagcagcatcaatacaaggcttgaaagaaca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atatatgggatacatttaacaattgcagtaagcagcatcaatacaaggcttgaaagaaca 440
Query: 240 tgaaggaacagaatttcaaaagaagagctgaagaatgagaggaactgtatcctaagaaac 299
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 441 tgaaggaacagaatttcaaaagaagagctgaagaatgagaggaactgtagcctaagaaac 500
Query: 300 taagtaaaaccagagcattccaaaacagaatttccaaaagagaagactcctgtcctgttc 359
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 501 taagtaaaaccagagcattccaaaacagaatttccaaaagagaagactcgtgtcctgttc 560
Query: 360 ttcctctgcctgtgttttccactggacaagcacaagtgtggtcagcctataaggccacta 419
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 561 ttcctctgcctgtgttttccactggacaagcacacgtgtggtcagcctataaggccacta 620
Query: 420 agaagatagtctttatgcaaacagaccagaggatagagagcagaaagcagaaaagtgtgt 479
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agaagatagtct--atgcaaacagaccagaggatagagagcagaaagcagaaaagtgtgt 678
Query: 480 gaccatgtcagaaaatgcataaacctcagtatctaaattcatgtcatatatgcagcacta 539
||||||||||||||||| | ||||||||||||||||||||||| ||| ||||||| ||||
Sbjct: 679 gaccatgtcagaaaatgaacaaacctcagtatctaaattcatgccatgtatgcagtacta 738
Query: 540 accaattcctgagtcttctatgaatgcttatcagagc 576
|||||||||||||||||||| ||||||||||||||||
Sbjct: 739 accaattcctgagtcttctacgaatgcttatcagagc 775
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 975
Length adjustment: 10
Effective length of query: 566
Effective length of database: 965
Effective search space: 546190
Effective search space used: 546190
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
