Query= MSMg01no121_d07.b1 MSMg01no121_d07.b1 CHROMAT_FILE:
MSMg01no121_d07.b1 PHD_FILE: MSMg01no121_d07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:28:54 2005
(141 letters)
>mm_chr1_76407259_76407799
Length = 541
Score = 265 bits (137), Expect = 8e-76
Identities = 140/141 (99%)
Strand = Plus / Plus
Query: 1 atgatgatgactatagattataagcgggaactgaacaacacgtcttgcttattgactagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgatgatgactatagattataagcgggaactgaacaacacgtcttgcttattgactagt 260
Query: 61 agaatgctaaggttccattgccgcagccctactgacagcagatggactataacactctaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaatgctaaggttccattgccgcagccctactgacagcagatggactataacactctaa 320
Query: 121 aattgcatctagtaacattca 141
||||| |||||||||||||||
Sbjct: 321 aattgtatctagtaacattca 341
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 141
Length of database: 541
Length adjustment: 8
Effective length of query: 133
Effective length of database: 533
Effective search space: 70889
Effective search space used: 70889
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no121_d07.g1 MSMg01no121_d07.g1 CHROMAT_FILE:
MSMg01no121_d07.g1 PHD_FILE: MSMg01no121_d07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:28:54 2005
(285 letters)
>mm_chr1_76592123_76592807
Length = 685
Score = 513 bits (265), Expect = e-150
Identities = 280/287 (97%), Gaps = 5/287 (1%)
Strand = Plus / Minus
Query: 2 catattcagctcactttctccttccagaatcccagcctatgatgtga---ccaggtcttc 58
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 637 catattcagctcactttctccttccagaatcccagcctatgatgtgatat--aggtcttc 580
Query: 59 tagtctcaattaaatctttctagaaacattctaatagacacactcatgtgtgttccctaa 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 tagtctcaattaaatctttctagaaacattctaatagacacactcatgtgtgttccctaa 520
Query: 119 attcttaagttgacagtgtagattagccagcacatatacctagggaccactatcttggat 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 attcttaagttgacagtgtagattagccagcacatatacctagggaccactatcttggat 460
Query: 179 tagaatgatgcagtaaggaacttgcattctgtcctctaaactgtcaggtaaggttgagac 238
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 459 tagaatgatgcagtaaggaacttgcataatgtcctctaaactgtcaggtaaggttgagac 400
Query: 239 tgggatggtacaaggtgggaaaagaaggcttcacatacactgagtgc 285
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 tgggatggtacaaggtgggaaaagaaggcttcacatacactgagtgc 353
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
