NCCCATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTTAATACCCTATTTATACCACAAAGGGAAAAAGCACTAAT
GACATCTTTCATAGAGTTGAGTGTACTTTTTATTTAATTAGCTCTGTCTC
TTCAGAACATTTTATTTAATATAATCAAAGACCTATGAATTAAATAAGAA
TCCAAAATACAGAAACATAATAAAGACAAATATTTTTTCTGAGTAAACAT
TCTCCTGCATATGATTTTAAAGACCCTTCAGCAATACAGAGTCTGTATTA
TACCTATACATAGCTATTCATAATTAAACTTATACTCAATAAAAATTAAA
TTACAAAGGGATATTATGACATCAGAATATATAACTCACTGATACAATTT
GGACTCAGATGTTACAGTTTGTACCCCAAATCAATTAGTCTGATGTCTGA
AAGTGCAGATGCAGATTATGGTTTATAATTTTTCTCATTTTGTTAATTTC
TAGCAACTCCTAAAAATTGTCTTAACACCTCACAAGCTTTAGCTAGTTTA
TCATTGTCCTTTTATACAGAATTCATTTTCATATTCAATAATGGCTTTCT
CTAGCTAGTCCAAATTAGTGAATACCTTTTAATCAAGGTCCTGAAAGCTT
AAGTCATTCCTTAAGTACAACTCAAGAAGATAGATCATTTTATCTTACAA
AAACC

CTGATGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTATTAAAATTTTTGCATAGATATTCATAAG
TGAAGTTGGTCTGAAGTTTTATTTGTTGGATCTTTGGGTTAGGTATCAGA
GTAAATGTGGATTCATGGAATGAGTTTGGCAGTGTTGCTTCTGTTTTTAT
TTTGTAGAATAGTTTGAGGAATGCTGATATTCAGTCTTCTTTGAAAGTCT
GGTAGAATTCTGTACTAAAACCATCTGGCCTTGGGACTTTTTTAGATGGG
GCATTTTTAATGACTTATTTTTTTAGGGGTTATTGAACTGTTCAGTTTAT
CTGATCATGATTTAACTTTCGTACATAGAATCTGTGTAGAGAATCATCCA
TTTCATCTAGATTTTCCAGTTTGTCATGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTNTNTNNNNNTNTNNTCCNTTTTTTTNNNTTTTT
TTTTTNTTTTTTTTTTTTTTTTNTNNNTTTTTCCTCCCTCTTTTCCCCTT
CTCCCCTTTTCCCCCCCCTCTTCTCCCCCCCCTTTTCCCCTCCCTCCTCC
CCTCCCCTTTTCCTCCCCCCCCCCCCCTTCTTCCTCCTCCCCTTCTTCTC
CTCTCTTCCCCTTCCTCCTTTCTCCCCTCCTTTCNTTTCCTTTCCCCCTC
CCCCTCCCTCTCCCCTCTCCCCCTCCCCTCTCCTCCCCTCCCTCTTTTC

Query= MSMg01no121_p10.b1 MSMg01no121_p10.b1 CHROMAT_FILE:
MSMg01no121_p10.b1 PHD_FILE: MSMg01no121_p10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:29:55 2005
         (649 letters)



>mm_chr1_113864266_113865313
          Length = 1048

 Score = 1089 bits (563), Expect = 0.0
 Identities = 614/631 (97%), Gaps = 5/631 (0%)
 Strand = Plus / Minus

                                                                       
Query: 21  atttataccacaaagggaaaaagcactaatgacatctttcatagagttgagtgtactttt 80
           ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| 
Sbjct: 848 atttataccacaaagggaaaaagcactaatgacatctttcatagaattgagtatactttc 789

                                                                       
Query: 81  tatttaattagctctgtctcttcagaacattttatttaatataatcaaagacctatgaat 140
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 tatttaattagctctgtctcttcagaacattttatttaatataatcaaagacctatgaat 729

                                                                       
Query: 141 taaataagaatccaaaatacagaaacataataaagacaaatattttttctgagtaaacat 200
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 taaataagaatccaaaatacagaaacataataaagacaaatattttttctgagtaaacat 669

                                                                       
Query: 201 tctcctgcatatgattttaaagacccttcagcaatacagagtctgtattatacctataca 260
           |||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 668 tctcctgcatatgattttgaagactcttcagcaatacagagtctgtattatacctgtaca 609

                                                                       
Query: 261 tagctattcataattaaacttatactcaataaaaattaaattacaaagggatattatgac 320
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 608 tagctattcataattaaacttatactcaataaaaattaaattccaaagggatattatgac 549

                                                                       
Query: 321 atcagaatatataactcactgatacaatttggactcagatgttacagtttgtaccccaaa 380
           |||||||||||||||||||||||| |||||||||| |||||||||| ||||||||| |||
Sbjct: 548 atcagaatatataactcactgatataatttggactgagatgttacaatttgtaccc-aaa 490

                                                                       
Query: 381 tcaattagtctgatgtctgaaagtgcagatgc-agattatggtttataatttttctcatt 439
           ||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||
Sbjct: 489 tcaattagtctgatgtctgaaagagcagatgcca-attatggtttataatttttctcatt 431

                                                                       
Query: 440 ttgttaatttctagcaactcctaaaaattgtcttaacacctcacaagctttagctagttt 499
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 430 ttgttaatttctagcaactcctaaaaattgtcttaacacttcacaagctttagctagttt 371

                                                                       
Query: 500 atcattgtccttttatacagaattcattttcatattcaataatggctttctctagctagt 559
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 atcattgtccttttatacagaattcattttcatattcaataatggctttctctagctagt 311

                                                                       
Query: 560 ccaaattagtgaataccttttaatcaaggt-cctgaaagcttaagtcattccttaagtac 618
           |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 310 ccaaattagtgaataccttttaatcaag-tgcctgaaagcttaagtcattccttaagtac 252

                                          
Query: 619 aactcaagaagatagatcattttatcttaca 649
           |||||||||||||||||||||||||||||||
Sbjct: 251 aactcaagaagatagatcattttatcttaca 221


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1048
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1038
Effective search space:   663282
Effective search space used:   663282
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)