Query= MSMg01no123_e20.b1 MSMg01no123_e20.b1 CHROMAT_FILE:
MSMg01no123_e20.b1 PHD_FILE: MSMg01no123_e20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:32:51 2005
(332 letters)
>mm_chr1_25190097_25190829
Length = 733
Score = 596 bits (308), Expect = e-175
Identities = 326/332 (98%), Gaps = 1/332 (0%)
Strand = Plus / Plus
Query: 1 gctaagcttcttggtgtagcctttggccccaattcttaggaacagtaaaaaaaa-tattt 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 201 gctaagcttcttggtgtagcctttggccccaattcttaggaacagtaaaaaaaaatattt 260
Query: 60 cctgaaggcaactgaagaaaatgaactacttctcacaagccagaagctactctcagtcct 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctgaaggcaactgaagaaaatgaactacttctcacaagccagaagctactctcagtcct 320
Query: 120 agaaaaatatcaaaagtagataaaagcagattgaagatagatccctcagtcctgagctca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaaaaatatcaaaagtagataaaagcagattgaagatagatccctcagtcctgagctca 380
Query: 180 gagtttggagtaaggacaatacagaaaagaggaaaatatgacaatatgtaaatgtcacag 239
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagtttagagtaaggacaatacagaaaagaggaaaatatgacaatatgtaaatgtcacaa 440
Query: 240 aagttccaagatctgctcaataggacttcttgagcaaatttttaaagaaactgaaaagaa 299
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 441 aagttccaagatctgctcaataggacttcttgagcaaatgaataaagaaactgaaaagaa 500
Query: 300 gacagcatctaaagaaatactatggaagaatt 331
||||||||||||||||||||||||||||||||
Sbjct: 501 gacagcatctaaagaaatactatggaagaatt 532
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 733
Length adjustment: 9
Effective length of query: 323
Effective length of database: 724
Effective search space: 233852
Effective search space used: 233852
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no123_e20.g1 MSMg01no123_e20.g1 CHROMAT_FILE:
MSMg01no123_e20.g1 PHD_FILE: MSMg01no123_e20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:32:51 2005
(334 letters)
>mm_chr1_25295932_25296665
Length = 734
Score = 634 bits (328), Expect = 0.0
Identities = 331/332 (99%)
Strand = Plus / Minus
Query: 1 tatagatacatgattatgaggcactcctcttgcctggcctattactttcttagttaatgt 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 532 tatagatacatgattatgaggcactccccttgcctggcctattactttcttagttaatgt 473
Query: 61 tttactttgttttatttctatgcgttcatgaataatattaccatgctcagctttccgact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 tttactttgttttatttctatgcgttcatgaataatattaccatgctcagctttccgact 413
Query: 121 catctctgtcctctctgcactacaacccaggttcccaaaatggacccaacagtgtgagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 catctctgtcctctctgcactacaacccaggttcccaaaatggacccaacagtgtgagca 353
Query: 181 cagacacatctctttaatacttggcatgccttctcagttcaaagaaccccactgccttca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 cagacacatctctttaatacttggcatgccttctcagttcaaagaaccccactgccttca 293
Query: 241 ttatcacttcaataaaatgagtgtccaatgaacattcttttgccttttttataggcaata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 ttatcacttcaataaaatgagtgtccaatgaacattcttttgccttttttataggcaata 233
Query: 301 attagtcatacttttaaagtatgattgtctca 332
||||||||||||||||||||||||||||||||
Sbjct: 232 attagtcatacttttaaagtatgattgtctca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 334
Length of database: 734
Length adjustment: 9
Effective length of query: 325
Effective length of database: 725
Effective search space: 235625
Effective search space used: 235625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
