Query= MSMg01no124_c18.b1 MSMg01no124_c18.b1 CHROMAT_FILE:
MSMg01no124_c18.b1 PHD_FILE: MSMg01no124_c18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:34:54 2005
(424 letters)
>mm_chr1_171818268_171819091
Length = 824
Score = 781 bits (404), Expect = 0.0
Identities = 404/404 (100%)
Strand = Plus / Plus
Query: 18 gaattcttttcttgcattcttgtttgattttggtttctgggtaatgtcaactctatagaa 77
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 gaattcttttcttgcattcttgtttgattttggtttctgggtaatgtcaactctatagaa 277
Query: 78 gtattggaagaattccatcctcttaagtttttttagaataactcaagaagaattaatatt 137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 gtattggaagaattccatcctcttaagtttttttagaataactcaagaagaattaatatt 337
Query: 138 ggttctttacaattttatagcatttggcagtgaagtcatctggttctgggctttgctttg 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 ggttctttacaattttatagcatttggcagtgaagtcatctggttctgggctttgctttg 397
Query: 198 atgtaaattgtcttcattatggtttcaatcttcttactattgatctgtacattttttttt 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 atgtaaattgtcttcattatggtttcaatcttcttactattgatctgtacattttttttt 457
Query: 258 atgattcagtctttctaatactatttctggggtggataattggacaatagcatgtctggt 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 atgattcagtctttctaatactatttctggggtggataattggacaatagcatgtctggt 517
Query: 318 acccaaggtttctgttggatgtatctcagttgttttgaggaaaggaaggatgcttctgtt 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 acccaaggtttctgttggatgtatctcagttgttttgaggaaaggaaggatgcttctgtt 577
Query: 378 ctgagtctctttcagatagttctttccttcccaaagctatgtgt 421
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 ctgagtctctttcagatagttctttccttcccaaagctatgtgt 621
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 824
Length adjustment: 9
Effective length of query: 415
Effective length of database: 815
Effective search space: 338225
Effective search space used: 338225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no124_c18.g1 MSMg01no124_c18.g1 CHROMAT_FILE:
MSMg01no124_c18.g1 PHD_FILE: MSMg01no124_c18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:34:54 2005
(390 letters)
>mm_chr1_171890206_171890995
Length = 790
Score = 700 bits (362), Expect = 0.0
Identities = 383/392 (97%), Gaps = 4/392 (1%)
Strand = Plus / Minus
Query: 3 tcttgtctttcccgttggtattttctggttgttcttaccccttgaagacagagtgttagt 62
|||||||||||||||||| |||||||||||||||||||| |||| || ||||||||||||
Sbjct: 394 tcttgtctttcccgttggcattttctggttgttcttaccgcttggagtcagagtgttagt 335
Query: 63 ccaactatgagtttcctcctaacatcttgagatctttagaatttgccacagctgtttcca 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 ccaactatgagtttcctcctaacatcttgagatctttagaatttgccacagctgtttcca 275
Query: 123 ggtcctctcagcattcctttcagagggcaggctcaagctgaattagttccatgtttcata 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 ggtcctctcagcattcctttcagagggcaggctcaagctgaattagttccatgtttcata 215
Query: 183 aaaagctctgggatttttatttttattttttttttacatttcaattgtcaagtaaaatgt 242
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 214 aaaagctctgggatttttatttttattctttttttacatttcaattgtcaagtaaaatgt 155
Query: 243 aggctttgttttcggctcatgattcttctttctcagtgtcgcaggaaggaaaaccttagg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 aggctttgttttcggctcatgattcttctttctcagtgtcgcaggaaggaaaaccttagg 95
Query: 303 attacattgggggattacaattgaagccttcgtaatgac----tttttttttttttaaac 358
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 94 attacattgggggattacaattgaagccttcgtaatgactttttttttttttttttaaac 35
Query: 359 aaatttttggtttacttttttttaaacaaatt 390
||||||||||||||||||||||||||||||||
Sbjct: 34 aaatttttggtttacttttttttaaacaaatt 3
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 390
Length of database: 790
Length adjustment: 9
Effective length of query: 381
Effective length of database: 781
Effective search space: 297561
Effective search space used: 297561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
