Query= MSMg01no125_a04.b1 MSMg01no125_a04.b1 CHROMAT_FILE:
MSMg01no125_a04.b1 PHD_FILE: MSMg01no125_a04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:36:53 2005
(650 letters)
>mm_chr1_26191384_26192433
Length = 1050
Score = 1218 bits (630), Expect = 0.0
Identities = 642/646 (99%)
Strand = Plus / Plus
Query: 5 gaattcagacctggaagtactctactgtatgtatgttaggggtcctcacctcaggtggtg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagacctggaagtactctactgtatgtatgttaggggtcctcacctcaggtggtg 264
Query: 65 tatgctgcctgtttggtggaccagtgtttgagagatctcaggggtccagattaattgtga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tatgctgcctgtttggtggaccagtgtttgagagatctcaggggtccagattaattgtga 324
Query: 125 ctgctggtcctcctatagaactacccttctcctcagcttcattcagcctcccctaattca 184
||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 325 ctgctggtcctcctacagaactacctttctcctcagcttcattcagcctcccctaattca 384
Query: 185 acaacgggggccagctgcttctgtccattgattgggtacaaatatctgaatctgactctt 244
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 385 acaacgggggccagctgcttctgttcattgattgggtacaaatatctgaatctgactctt 444
Query: 245 tcagctgcctgttgggtcttttggagggcagtcacgataggcccctttttgtgagcactc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tcagctgcctgttgggtcttttggagggcagtcacgataggcccctttttgtgagcactc 504
Query: 305 catacatagcctcagtgtcaggctttgggacctcctcttgttgtgcttttcattgtaata 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 catacatagcctcagtgtcaggctttgggacctcctcttgttgtgcttttcattgtaata 564
Query: 365 ctagtccagagagtcttgaaagtagttagaagattcataataagtagttataaataatta 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ctagtccagagagtcttgaaagtagttagaagattcataataagtagttataaataatta 624
Query: 425 gtacttttcctttatgcataaatacaccacatacccagtcttgcttatgctgtttcccac 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gtacttttcctttatgcataaatacaccacatacccagtcttgcttatgctgtttcccac 684
Query: 485 cctcagaatttcatttattcaatacttgccttctcttcttctttggccattatcctataa 544
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 cctcagcatttcatttattcaatacttgccttctcttcttctttggccattatcctataa 744
Query: 545 aactatgtacaagtaaaggagatgtagggtaaaatggtaaacataacctatgtctgtatt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aactatgtacaagtaaaggagatgtagggtaaaatggtaaacataacctatgtctgtatt 804
Query: 605 aattaaagagcctgctaggtattttaaaatagattatgtttatgta 650
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 aattaaagagcctgctaggtattttaaaatagattatgtttatgta 850
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1050
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1040
Effective search space: 665600
Effective search space used: 665600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no125_a04.g1 MSMg01no125_a04.g1 CHROMAT_FILE:
MSMg01no125_a04.g1 PHD_FILE: MSMg01no125_a04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:36:53 2005
(626 letters)
>mm_chr1_26279344_26280370
Length = 1027
Score = 1120 bits (579), Expect = 0.0
Identities = 615/627 (98%), Gaps = 1/627 (0%)
Strand = Plus / Minus
Query: 1 tcttccc-agattaaatgtacatacattcactacactggcatattgtgttgcaaaccaaa 59
||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 671 tcttcccaagattaaatgtacatacattcactacactgccatattgtgttgcaaaccaaa 612
Query: 60 aacatcaacattatgtcatcctatggagatctgcctaagcagactgccagaatccccata 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 aacatcaacattatgtcatcctatggagatctgcctaagcagactgccagaatccccata 552
Query: 120 aaatcatatgattcaaattgcaatcagacttgataagcaagaaaaaacatgagtattttt 179
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 551 aaatcatatgattcaaattgcaatcagacttgataagcaagaaaagtcatgagtattttt 492
Query: 180 acaaatctttattatttatcatatttttacttatgtacttgttttgttgaactacaacca 239
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 491 acaaatctttattatttatcatatttttacttatgtacttgtttttttgaactacaacca 432
Query: 240 tataccattcttggtcttggaattaaataatagttctagtgacagaaaaatatagataca 299
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 431 tataccattcttggtcttggaattaaataatagttctagtgacaggaaaatatagataca 372
Query: 300 tttttagaaaattaatatgctatcaagcaaagcatgcaaaaggttattcaagtaatctat 359
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 371 tttttagaaaattaatatgctatcaagcaaagcatgcaaaaggttattcaaggaatctag 312
Query: 360 atactagaaaactatgaagggttacacccaggaaatgcctattaatgagtcctgatgaga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 atactagaaaactatgaagggttacacccaggaaatgcctattaatgagtcctgatgaga 252
Query: 420 aattgatactgctatattccatcaaatgttgttttgcataaaacaattgtgttctgttgt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 aattgatactgctatattccatcaaatgttgttttgcataaaacaattgtgttctgttgt 192
Query: 480 tgtgggaaacagtatgatcatagccaacctgccgatgaaaggcttcgtttggcttatgtg 539
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 191 tgtgggaaacagtatgatcatagccaacctgctgatgaaaggcttcgtttggcttatgtg 132
Query: 540 ttccaggcacagtacatcactgaggggagtcaggggaggaactcaagcagggcagaaaac 599
|||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 131 ttccaggcacagtatatcactgaggtgagtcaggggaggaactcaagcagggcagaaaac 72
Query: 600 tggaggtaagaaattaagcagaggcca 626
| |||||||||||||||||||||||||
Sbjct: 71 tagaggtaagaaattaagcagaggcca 45
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1027
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1017
Effective search space: 626472
Effective search space used: 626472
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
