Query= MSMg01no125_j07.b1 MSMg01no125_j07.b1 CHROMAT_FILE:
MSMg01no125_j07.b1 PHD_FILE: MSMg01no125_j07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:37:40 2005
(403 letters)
>mm_chr1_127662940_127663742
Length = 803
Score = 756 bits (391), Expect = 0.0
Identities = 398/401 (99%), Gaps = 2/401 (0%)
Strand = Plus / Plus
Query: 1 tcaagatctccataccaagatccaggtcagaaacttctatctcccagcctacagattagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcaagatctccataccaagatccaggtcagaaacttctatctcccagcctacagattagg 260
Query: 61 atcactggtgagccttccaattctggattgtagttcatttcagatatagtcaagttgaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atcactggtgagccttccaattctggattgtagttcatttcagatatagtcaagttgaca 320
Query: 121 actaggtatagccactccagatggcaagcactttactgcctgggtctttgcctgagccct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actaggtatagccactccagatggcaagcactttactgcctgggtctttgcctgagccct 380
Query: 181 ttaactttaaaagtccatatatctactcactagggttgagaaactggtatgagggctcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttaactttaaaagtccatatatctactcactagggttgagaaactggtatgagggctcag 440
Query: 241 gagaataaggtcatcactgctcactgtgcttgcttctgctgtcacagccagtgtcttgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagaataaggtcatcactgctcactgtgcttgcttctgctgtcacagccagtgtcttgaa 500
Query: 301 cgttggctccttgcaaaggagccacgatggtagttctttctaagaaggagtgtgtgtgcg 360
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 501 cgttggctccttgcaaaggagccatgatggtagttctttctaagaaggagtgtgtgtg-- 558
Query: 361 tgtgtgtgtgtgtgtgtgtgtttgtatatatgtatatgatg 401
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tgtgtgtgtgtgtgtgtgtgtttgtatatatgtatatgatg 599
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 403
Length of database: 803
Length adjustment: 9
Effective length of query: 394
Effective length of database: 794
Effective search space: 312836
Effective search space used: 312836
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no125_j07.g1 MSMg01no125_j07.g1 CHROMAT_FILE:
MSMg01no125_j07.g1 PHD_FILE: MSMg01no125_j07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:37:40 2005
(248 letters)
>mm_chr1_127758018_127758665
Length = 648
Score = 456 bits (236), Expect = e-133
Identities = 245/248 (98%)
Strand = Plus / Minus
Query: 1 gtcctgactttactcagtgaagtatctggcctctgcatgtatgcatggctgtacatgcat 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 570 gtcctgactttactcagtgaagtatctggcctctgcatgtatgcatggttgtacatgcat 511
Query: 61 ggatgaacacatggggacacacacacacacacacacacacacacacacacacacacacac 120
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 ggatgaacacatggacacacacacacacacacacacacacacacacacacacacacacac 451
Query: 121 actgaaaggagtaagagttagcctgcaagagagcaactgagaccaagcaagactcagtat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 actgaaaggagtaagagttagcctgcaagagagcaactgagaccaagcaagactcagtat 391
Query: 181 tgctcagacttggggaatgaagtggcagcttcctcctgagcctgacagggctcagcaggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 tgctcagacttggggaatgaagtggcagcttcctcctgagcctgacagggctcagcaggg 331
Query: 241 ctacacaa 248
||||||||
Sbjct: 330 ctacacaa 323
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 48
Number of extensions: 21
Number of successful extensions: 20
Number of sequences better than 10.0: 1
Number of HSP's gapped: 16
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 648
Length adjustment: 9
Effective length of query: 239
Effective length of database: 639
Effective search space: 152721
Effective search space used: 152721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
