Query= MSMg01no126_n09.b1 MSMg01no126_n09.b1 CHROMAT_FILE:
MSMg01no126_n09.b1 PHD_FILE: MSMg01no126_n09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:39:22 2005
(373 letters)
>mm_chr1_84514275_84515046
Length = 772
Score = 667 bits (345), Expect = 0.0
Identities = 366/379 (96%), Gaps = 11/379 (2%)
Strand = Plus / Minus
Query: 4 gaattcctgaagttgtccgtatgctatcatttgtacacttctaaataataagtgtatgtg 63
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 gaattcctgaagttgtttgtatgctatcatttgtacacttctaaataataagtgtatgtg 476
Query: 64 tggattcagctttgtatctac----------aaaaaaaaaaaaggacaaaacaaaacaaa 113
||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 475 tggattcagctttgtatctacaaaaaaaaaaaaaaaaaaaaaaggacaaaacaaaacaaa 416
Query: 114 aaacaaacccacacacagagaagtttgctttgttttctccatgcataatctccacattat 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 aaacaaacccacacacagagaagtttgctttgttttctccatgcataatctccacattat 356
Query: 174 agggcagtactttcctgacttctgtagaatgtttttattgtttttttttctccagtcatt 233
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 355 agggcagtactttcctgacttctgtagaatgtttttattg-ttttttttctccagtcatt 297
Query: 234 tccttataagcatgtgtatgtgtgtgtgtgtatgtatgtacatagaccagaagtcaatgt 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 tccttataagcatgtgtatgtgtgtgtgtgtatgtatgtacatagaccagaagtcaatgt 237
Query: 294 tgatatcgtcttctttgattactttccaccttatttttatctatctatctatctatctat 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 tgatatcgtcttctttgattactttccaccttatttttatctatctatctatctatctat 177
Query: 354 ctatctatctatctatcta 372
|||||||||||||||||||
Sbjct: 176 ctatctatctatctatcta 158
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 53
Number of extensions: 13
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 772
Length adjustment: 9
Effective length of query: 364
Effective length of database: 763
Effective search space: 277732
Effective search space used: 277732
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no126_n09.g1 MSMg01no126_n09.g1 CHROMAT_FILE:
MSMg01no126_n09.g1 PHD_FILE: MSMg01no126_n09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:39:22 2005
(340 letters)
>mm_chr1_84392179_84392918
Length = 740
Score = 642 bits (332), Expect = 0.0
Identities = 338/340 (99%)
Strand = Plus / Plus
Query: 1 cttgaaaaacaaaacaaacaaacaaacaagatcccaggctggcgatcacaatcttccagt 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttgaaaaacaaaacaaataaacaaacaagatcccaggctggcgatcacaatcttccagt 260
Query: 61 catggagcccagtctcctatttataaaaagtgaagaactctcagaaaattgctgaccaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catggagcccagtctcctatttataaaaagtgaagaactctcagaaaattgctgaccaag 320
Query: 121 gacttttcacttgaggaaaaaaatgagtaaagaaaagccattgttaagatgactccttga 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 gacttttcacttgaggaaaaaaatgagtaaagaaaagccattgttaagacgactccttga 380
Query: 181 gcccatgaagaagtaaagttattcccccatcttaaaccttttgagattgacctgaaaggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcccatgaagaagtaaagttattcccccatcttaaaccttttgagattgacctgaaaggc 440
Query: 241 aaacttaggttttcaatattgttaaagtctgctttgttttggagccagatgctgaacctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaacttaggttttcaatattgttaaagtctgctttgttttggagccagatgctgaacctc 500
Query: 301 gtgcccttttatgcagctccaggaagcagaacattcagag 340
||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtgcccttttatgcagctccaggaagcagaacattcagag 540
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 740
Length adjustment: 9
Effective length of query: 331
Effective length of database: 731
Effective search space: 241961
Effective search space used: 241961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
