Query= MSMg01no129_f04.b1 MSMg01no129_f04.b1 CHROMAT_FILE:
MSMg01no129_f04.b1 PHD_FILE: MSMg01no129_f04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:42:41 2005
(454 letters)
>mm_chr1_180138901_180139754
Length = 854
Score = 855 bits (442), Expect = 0.0
Identities = 451/454 (99%)
Strand = Plus / Plus
Query: 1 taacctgggagtgtaagctaaataaacccttccgttttctaagttgcttcccgccaggat 60
|||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 201 taacctgggagtgtaagctaaataaacccttccgttttctaagttgcttcatgtcaggat 260
Query: 61 atttgtcacaacaacagaaatcaaagtagaatatacttacataaaattttagaaatagtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atttgtcacaacaacagaaatcaaagtagaatatacttacataaaattttagaaatagtc 320
Query: 121 tgtatgtttgttcccaagtagagaactacttgtttcaagcagctcatgaaataacccaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtatgtttgttcccaagtagagaactacttgtttcaagcagctcatgaaataacccaca 380
Query: 181 cttccatattgacttggcaataagctaactgaagaagtctgtaaaaaataaatagataaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttccatattgacttggcaataagctaactgaagaagtctgtaaaaaataaatagataaa 440
Query: 241 taaaatgaaaaatttaagtgtaataatacttaataattagaggagggcgataattcatag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taaaatgaaaaatttaagtgtaataatacttaataattagaggagggcgataattcatag 500
Query: 301 atacaggagtcttcataacaagagctaatatttttaagagccaacatttttaagagtttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atacaggagtcttcataacaagagctaatatttttaagagccaacatttttaagagtttt 560
Query: 361 ttgtttaccagccattgtaaggagaaaggaagccacatgatacatcttatgttaaattaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttgtttaccagccattgtaaggagaaaggaagccacatgatacatcttatgttaaattaa 620
Query: 421 aacaagtagtcacaaagaaactcaaaggatgggg 454
||||||||||||||||||||||||||||||||||
Sbjct: 621 aacaagtagtcacaaagaaactcaaaggatgggg 654
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 854
Length adjustment: 10
Effective length of query: 444
Effective length of database: 844
Effective search space: 374736
Effective search space used: 374736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no129_f04.g1 MSMg01no129_f04.g1 CHROMAT_FILE:
MSMg01no129_f04.g1 PHD_FILE: MSMg01no129_f04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:42:41 2005
(334 letters)
>mm_chr1_180281853_180282586
Length = 734
Score = 603 bits (312), Expect = e-177
Identities = 324/330 (98%), Gaps = 4/330 (1%)
Strand = Plus / Minus
Query: 1 agaacacatgccacttaaatttttttttctaacctgtgctaggttgaacccgcagatgaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 331 agaacacatgccacttaaatttttttttctaacctgtgctaggttgaacctgcagatgaa 272
Query: 61 ctcagaggcacagaggaacaagtgtataggttctggaataagcagaccaataaggtctca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 ctcagaggcacagaggaacaagtgtataggttctggaataagcagaccaataaggtctca 212
Query: 121 agaatgtcagaggggctagagagaaggctcagtggttaaaacagcatttagtgctcttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 agaatgtcagaggggctagagagaaggctcagtggttaaaacagcatttagtgctcttcc 152
Query: 181 agaggacttgagagttcagttcctggcaagcacaccaggtggctcacagcacatgcaagt 240
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 151 agaggacttgagagttcagttcctgacaagcacaccaggtggctcacagcacatgcaagt 92
Query: 241 ccaattccagggatccaccatccaattctagtctcttttctctctctctctctctctctc 300
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 91 ccaattccagggatccaccatccaattctagtctc----ctctctctctctctctctctc 36
Query: 301 tctctctctctctctctctctctctctctc 330
||||||||||||||||||||||||||||||
Sbjct: 35 tctctctctctctctctctctctctctctc 6
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 64
Number of extensions: 27
Number of successful extensions: 26
Number of sequences better than 10.0: 1
Number of HSP's gapped: 23
Number of HSP's successfully gapped: 1
Length of query: 334
Length of database: 734
Length adjustment: 9
Effective length of query: 325
Effective length of database: 725
Effective search space: 235625
Effective search space used: 235625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
