Query= MSMg01no130_e02.b1 MSMg01no130_e02.b1 CHROMAT_FILE:
MSMg01no130_e02.b1 PHD_FILE: MSMg01no130_e02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:43:58 2005
(324 letters)
>mm_chr1_148371229_148371952
Length = 724
Score = 619 bits (320), Expect = 0.0
Identities = 323/324 (99%)
Strand = Plus / Minus
Query: 1 gtgtgtttacttaactctaattttctagtgtgtttttcaataatagctgagtgtgtcttt 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 524 gtgtgtttacttaactctaattttctagtgtgtttttcaataatagctgtgtgtgtcttt 465
Query: 61 aagataagacagcacacagacacagcaaagtggagcctttgctattttttttaagctgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 aagataagacagcacacagacacagcaaagtggagcctttgctattttttttaagctgtt 405
Query: 121 gctaatttcaggctgacagaagaggtagtttaattagtgagctgttaatatctatttaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gctaatttcaggctgacagaagaggtagtttaattagtgagctgttaatatctatttaag 345
Query: 181 tgagcagccagggaaatctctgctggagcaaggacatgcaaattcctggccaagctactc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 tgagcagccagggaaatctctgctggagcaaggacatgcaaattcctggccaagctactc 285
Query: 241 ttcctacctcactgcctcacgcagctattttaaaggggaatatacatatacgtgtacgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 ttcctacctcactgcctcacgcagctattttaaaggggaatatacatatacgtgtacgtg 225
Query: 301 tactgtacgtgtgcgtgtgcgtgt 324
||||||||||||||||||||||||
Sbjct: 224 tactgtacgtgtgcgtgtgcgtgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 724
Length adjustment: 9
Effective length of query: 315
Effective length of database: 715
Effective search space: 225225
Effective search space used: 225225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no130_e02.g1 MSMg01no130_e02.g1 CHROMAT_FILE:
MSMg01no130_e02.g1 PHD_FILE: MSMg01no130_e02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:43:58 2005
(304 letters)
>mm_chr1_148276966_148277670
Length = 705
Score = 574 bits (297), Expect = e-168
Identities = 303/305 (99%), Gaps = 1/305 (0%)
Strand = Plus / Plus
Query: 1 gcctattttaattccatatacattatgagaggcccatgaataaaagataattagtacatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcctattttaattccatatacattatgagaggcccatgaataaaagataattagtacatt 260
Query: 61 taaaaacaaaccaaaagcaaacaaacaaacaaaaagaacttgcaagatagcatatcatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taaaaacaaaccaaaagcaaacaaacaaacaaaaagaacttgcaagatagcatatcatat 320
Query: 121 gaaggtactatctcctaagccagagaaactctcttccaaacctgggatgcacagtataaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaaggtactatctcctaagccagagaaactctcttccaaacctgggatgcacagtataaa 380
Query: 181 aggagagggtgacttccatatctgaagagtggtatgcatgcaggtacacacatacagaca 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 aggagagggtgacttccatatctgaagagtagtatgcatgcaggtacacacatacagaca 440
Query: 241 tatacacaaattaataagttaatacagtggaaataaaaaaa-taacactaatcaaaaatt 299
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 441 tatacacaaattaataagttaatacagtggaaataaaaaaaataacactaatcaaaaatt 500
Query: 300 gcatt 304
|||||
Sbjct: 501 gcatt 505
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 304
Length of database: 705
Length adjustment: 9
Effective length of query: 295
Effective length of database: 696
Effective search space: 205320
Effective search space used: 205320
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
