ACTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAAAGAGGATCCGCGG
AATTCCTTCTTCCGGTTTCTAGAAGCCACTGTCACCAAGAGAACTGTGAC
AAAGAAGTTTGTGCTTCATCATCAGTGGGTGACACTGCCTGGGGAGGTTT
ACTAGATGTGGTCTTACTAAAGGAAGTATGTCATTCACTCTGGGCTTTGA
AAGTAGAGGGCCTTGAATATTCCCACTTTGTTCTGCCTGCTTCAAATTTC
CAGTTCCAGGGTGTGAACTCTCAGCTCCTTGTTCCTGCTTCCAGGCCTGT
TGGTTACTATGAACTTCTACCTACCTACCTACCTACTTCTGTGCTATGAT
ATACTTGCATCCCACTGGAATCAAAAGCCAGAATAAACTCTTTCATCCTT
GAGTTGCTTTTGCTTATGGTGTTTTATCGGAGTGACGGAAAATTAACTAA
TATTATTTTATTGAGATATTGATATGCTGTAACAGAAAGATCACACAAAG
TGTTGCCAGACTGTTATCTGGATTCTCCTTACTACTCCCTCCAACGCTGC
ATTTTCAAATAGGGGGGGGGGTGCTGTGCATAAGAGGTAAAGTCTGAAAG
TGGTACCCTAGTAATGCATCTTTCAGTGATGCCATTGCCCGTGCTGGACA
ATTTATCTGAATCAAGGGTTTTTGTGTCACCCAAGTTCTTAATTAAACAT
TCATCCATGCATCAGN

TTCCTCGATGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGG
CAGAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATG
CAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAA
GATCAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAG
GAACACTCCTCTATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGG
AAATCAGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGA
TCCAGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTA
AGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATATTAGCC
AGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAA
AATGTGGTACATCTACACAATGGAGAACTACTCAGCTATTAAAAAGAATG
AATTTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCAACATCCTG
AGTGAGGTTACACATTCACAAAGGAACTCACACAATATGTACTCACTGAT
AAGTGGATATTAGCCCCAAACCCAGGATACCCGAGATATAAGATACAATT
TCCTAAACACATGAAACTCAAGAAGAATGAAGACTG

Query= MSMg01no131_e22.b1 MSMg01no131_e22.b1 CHROMAT_FILE:
MSMg01no131_e22.b1 PHD_FILE: MSMg01no131_e22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:29 2005
         (672 letters)



>mm_chr1_96955571_96956641
          Length = 1071

 Score = 1021 bits (528), Expect = 0.0
 Identities = 592/620 (95%), Gaps = 14/620 (2%)
 Strand = Plus / Minus

                                                                        
Query: 62   agtttgtgcttcatcatcagtgggtgacactgcctggggaggtttactagatgtggtctt 121
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1071 agtttgtgcttcatcatcagtgggtgacactgcctggggaggtttactagatgtggtctt 1012

                                                                        
Query: 122  actaaaggaagtatgtcattcactctgggctttgaaagtagagggccttgaatattccca 181
            ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||
Sbjct: 1011 actaaaggaagtatgtcattcactctgggctttgaaagtagagagccttgcatattctca 952

                                                                        
Query: 182  ctttgttctgcctgcttcaaatttccagttccagggtgtgaactctcagctccttgttcc 241
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 951  ctttgttctgcctgcttcaaatttccagttccagggtgtgaactctcagctccttgttcc 892

                                                                        
Query: 242  tgcttccaggcctgttggttactatgaacttctacctacctacctacctacttctgtgct 301
            ||||||||||||||||||||||||| |||||    |||||||||||||||||||||||||
Sbjct: 891  tgcttccaggcctgttggttactattaactt----ctacctacctacctacttctgtgct 836

                                                                        
Query: 302  atgatatacttgcatcccactggaatcaaaagccagaataaactctttcatccttgagtt 361
            ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 835  atgatatacttgcatccaactggaatcaaaagccagaataaacgctttcatccttgagtt 776

                                                                        
Query: 362  gcttttgcttatggtgttttatcggagtgacggaaaattaactaatattattttattgag 421
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 775  gcttttgcttatggtgttttatcggagtgacggaaaagtaactaatattattttattgag 716

                                                                        
Query: 422  atattgatatgctgtaacagaaagatcacacaaagtgttgccagactgttatctggattc 481
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 715  atattgatatgctgtaacagaaagattacacaaagtgttgccagactgttatctggattc 656

                                                                        
Query: 482  tccttactactccctccaacgctgcattttcaaatag-ggggggg---ggtg------ct 531
            |||||||||||||||||||| ||||||||||| || | |||||||   ||||      ||
Sbjct: 655  tccttactactccctccaacactgcattttcacatggcgggggggtggggtgggggggct 596

                                                                        
Query: 532  gtgcataagaggtaaagtctgaaagtggtaccctagtaatgcatctttcagtgatgccat 591
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||
Sbjct: 595  gtgcataagaggtaaagtctgaaagtggtaccctagtaatgcatctttcagtgatatcat 536

                                                                        
Query: 592  tgcccgtgctggacaatttatctgaatcaagggtttttgtgtcacccaagttcttaatta 651
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535  tgcccatgctggacaatttatctgaatcaagggtttttgtgtcacccaagttcttaatta 476

                                
Query: 652  aacattcatccatgcatcag 671
            ||||||||||||||||||||
Sbjct: 475  aacattcatccatgcatcag 456


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 672
Length of database: 1071
Length adjustment: 10
Effective length of query: 662
Effective length of database: 1061
Effective search space:   702382
Effective search space used:   702382
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)