CCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCAGAGTGTCTTGACAAGCTTGCAATCCCACCAACAATGGAGGAGT
GTTCCTCTTTCTCCACATCCTCGCCAGCATCTGCTGTCACCTGTCACCTG
AATTTTTGATCTTAGCCATTCTGACTGGTGTGAGGTGGAATCTCAGTGTT
GTTTTGATTTTCATTTCCCTGATGATTAAGGATGTTGAACATTTTTTCCA
GGTGCTTCTCTGCCATTTGGTATTCCTCAGGTGAGAATTCTTTGTTTAGC
CCTGAGCCCCATTTTTTAATGGGGTTATTTGATTTTCTGGAGTCCACCTT
CTTGAGTTATATATATATATATATTGGATATTAGTCCCCTATCTGATTTA
GGATAGGTAAAGTTCCTTTCCCAATCTGTTGGTGGCCTTTTTGTCTTATT
GACAGTGTCTTTTGCCTTACAGAAGCTTTGTAATATTATGAGGTCCCATT
TGTTGATTCTTGATCTTAGAGCACAAGCCATTGCTGTTCTATTCAGGCAT
TTTCCCCCTGTGCCCGTATCTTCGAGGCTTTTCCCCACTTTCTCCTCTAT
AACAGAGGAATGGATACAGAAAACGTGGTACTACTCAGCTATTAAAAAGA
ATGAATTTATGAAATTCCTAGGCAAATGGATGGACCTGGAGGGCATCATC
CTGAGTGAGGTAAC

TTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXTTTCCCGAGGAATTCCAGTCCTGACTTCTTTTGGTGATAAACA
GCAATGTGGAAGTTTAACCCGAATAAACCCTTTCCTCCCCAACTTGCTTC
TTGGTCAAGATGTTTGTACAGGAATAGAAACCCTGACTAAGACAATAATA
GCTATCTTAAAAAAGAAAGTCTCACTTAGGGTTTCTTCTTATTTAATTTT
TCTTTTATGGCAAAAGTTAATCATAACTTTGGCATAAAGTGTGATAGTAG
AATAGACTTTTCCTCTCTGGTCAGAGTCTAAAACTTCCTGGGGATTTAAA
AATATTTTTATATATTAATTTTCACATATCAATACTTTATAAATTTATGT
ATGTACGCTTTGGGTATTCTTTTTCTAGAAATCACTTACATATTGCTAGA
AAGAATCCTCCAGGAAAAACATCTCTTTCATCAGGAAGGGACAAACTACA
AGGACATAAAAATGTTATAAATGGTGTTTTGTTCTGGATAATGACCCATC
TTCACTGTACCTCCTAGATTTATGATTATCGTGAGTTTTACAACCACAAA
ATGCACATATTCCTTAAACACGCCCAGGAAAGGAGCCCAGTGTGCAATAG
AGAGGAAAGGATTCCTTGTGGAACATGAATGTCTAAAATAGGCCTAATGC
AATGAAAGGCGAC

Query= MSMg01no131_g03.g1 MSMg01no131_g03.g1 CHROMAT_FILE:
MSMg01no131_g03.g1 PHD_FILE: MSMg01no131_g03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:35 2005
         (579 letters)



>mm_chr1_79130107_79131085
          Length = 979

 Score =  826 bits (427), Expect = 0.0
 Identities = 578/723 (79%), Gaps = 144/723 (19%)
 Strand = Plus / Plus

                                                                       
Query: 1   aataaaccctttcctccccaacttgcttcttggtcaagatgtttgtacaggaatagaaac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57  aataaaccctttcctccccaacttgcttcttggtcaagatgtttgtacaggaatagaaac 116

                                                                       
Query: 61  cctgactaagacaataatagctatcttaaaaaagaaagtctcacttagggtttcttctta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 cctgactaagacaataatagctatcttaaaaaagaaagtctcacttagggtttcttctta 176

                                                                       
Query: 121 tttaatttttcttttatggcaaaagttaatcataactttggcataaagtgtgatagtaga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 tttaatttttcttttatggcaaaagttaatcataactttggcataaagtgtgatagtaga 236

                                                                       
Query: 181 atagacttttcctctctggtcagagtctaaaacttcctggggatttaaaaatatttttat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 atagacttttcctctctggtcagagtctaaaacttcctggggatttaaaaatatttttat 296

                                                                       
Query: 241 atattaattttcacatatcaatactttataaatttatgtatgtacgctttgggtattctt 300
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 297 atattaattttcacatatcaatactttataaatttatgtatgtatgctttgggtattctt 356

                                                                       
Query: 301 tttctagaaatcacttacatattgctagaaagaatcctccaggaaaaacatctctttcat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 tttctagaaatcacttacatattgctagaaagaatcctccaggaaaaacatctctttcat 416

                                                                       
Query: 361 caggaagggaca------------------------------------------------ 372
           ||||||||||||                                                
Sbjct: 417 caggaagggacatatgtaaaataaagtttgaaaagcactatatgttttatatgaaggagt 476

                                                                       
Query: 373 ----------------aac----------------------------------------- 375
                           |||                                         
Sbjct: 477 tacacacactcattaaaacatgaagttaattcagtatgtgcttcaacctacaaacacaaa 536

                                                                       
Query: 376 ---------------------------------------tacaaggacataaaaatgtta 396
                                                  |||||||||||||||||||||
Sbjct: 537 cacacacatacacaaacatactactactactactgctactacaaggacataaaaatgtta 596

                                                                       
Query: 397 taaatggtgttttgttctggataatgacccatcttcactgtacctcctagatttatgatt 456
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 taaatggtgttttgttctggataatgacccatcttcactgtacctcctagatttatgatt 656

                                                                       
Query: 457 atcgtgagttttacaaccacaaaatgcacatattccttaaacacgcccaggaaaggagcc 516
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 atcgtgagttttacaaccacaaaatgcacatattccttaaacacgcccaggaaaggagcc 716

                                                                       
Query: 517 cagtgtgcaatagagaggaaaggattccttgtggaacatgaatgtctaaaataggcctaa 576
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 cagtgtgcaatagagaggaaaggattccttgtggaacatgaatgtctaaaataggcctaa 776

              
Query: 577 tgc 579
           |||
Sbjct: 777 tgc 779


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 979
Length adjustment: 10
Effective length of query: 569
Effective length of database: 969
Effective search space:   551361
Effective search space used:   551361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)