CCCCCAGAATTTGCGGCGCTAAACGACTCCTTTCAAAGAGGACCGCGGAT
TCAGATTCTCCCTACCATTGTAAGCACAAATTCATCTGGGTGGGATCCCA
TCCTGAGATTACCATTCCCAGTATCCTTGACTATAGCACACATACTTATG
TGAACACAACAAAGAAAAGAGTTTCAATGCTTGATGGGGAATATTGGAGC
CCCTTATGACCCCCTACAGATGTTGTTTCATCTGAGATTCATATCACAGC
TCAAGTATAAATAGGGGTGAGAAATTTTATCTGCTAAATAGTATTTTATA
GATAAACTCTGGGATCAATAATGCTCAATGAACCTACTATTTCCTGGAAG
TAGGCCATGGCTCAAGAGAAGGCCAAGTAAACAGCAGTAACTAAACACTG
TACTGCATGATGTGCTGTAAGCTTTACTATAAACACATGGAATAATAGAA
GGAATGGCTTATAGGCCACTTAAAATCCACATTTTATTCATGTATAGAGA
CCATGCTTATGTAACGTTTAATTCTTAAGCATTTTAACAACAGCTGTTTC
CTCTCTCAGTCTTTCCTTTTTTCAAGGAAGTTTTTCTTTGAAACAGGGCC
TCAAGTCACTCAAGCTGGCCTTCAACATGGCATATAGTAAAGATAACCTT
CAATTTCTGATCATCCTGATTTCACATCCTGAGTGCTGAAATTATTGAT

CCAACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXTTGCACGCGGATTCTTGGGATTGAATAGTTGCCTTTTTCTCCA
ACATACTTTATTCTTCGCCTCAATGTACTCTAGTGGCATTGACTACAGAA
GATCAGAGGATAGCTGAAGGCACTGGAAGAATTAGTACCTTGGAGAAGCC
CTCACCATGAGAACAGATGTCCAGTGTGTGCTCTTAACCTGGGAGCCATT
GCTATAGTCCAATTTTTCTTTTGAGATAGGGTCTTATATATCCCTTACTG
GTCTTTAACTTATGATATAGTAACCTTGATTTTACTGTGCATTAGAGAAT
GGGAGACTTAGAGGAAAAAATAGAGAGAGACACAGAGAGACTTCAAGATA
GGAAGTAAGGTAAACAGGAAGAGGAGAATGGGGAGAAGAAGAGAGAAAGA
GGATAGGGAATAAGATATGGAAAGAAGAAAAAGAGTGGAATGGATAGGAA
AGAAGTTAGAGAAGAGTGGAGACAGAAAAATTTAAAGATGAAGAAAGACA
GGAGTCAGAGTCATAAGGAATAAGAATGAGACAGAGGGAAACTGGGAGGG
AAGAACTGGGAAAGAGTAAAGAGTATAGATGGAGTAACAGATCTCAGGGA
GACAGTGAGGCCAGACAGGATTTAGTAAGGCAGAGGCAGAGGCAGAGAGA

Query= MSMg01no131_k07.b1 MSMg01no131_k07.b1 CHROMAT_FILE:
MSMg01no131_k07.b1 PHD_FILE: MSMg01no131_k07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:56 2005
         (637 letters)



>mm_chr1_102278438_102279474
          Length = 1037

 Score = 1208 bits (625), Expect = 0.0
 Identities = 634/637 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   taccattgtaagcacaaattcatctgggtgggatcccatcctgagattaccattcccagt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taccattgtaagcacaaattcatctgggtgggatcccatcctgagattaccattcccagt 260

                                                                       
Query: 61  atccttgactatagcacacatacttatgtgaacacaacaaagaaaagagtttcaatgctt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atccttgactatagcacacatacttatgtgaacacaacaaagaaaagagtttcaatgctt 320

                                                                       
Query: 121 gatggggaatattggagccccttatgaccccctacagatgttgtttcatctgagattcat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatggggaatattggagccccttatgaccccctacagatgttgtttcatctgagattcat 380

                                                                       
Query: 181 atcacagctcaagtataaataggggtgagaaattttatctgctaaatagtattttataga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atcacagctcaagtataaataggggtgagaaattttatctgctaaatagtattttataga 440

                                                                       
Query: 241 taaactctgggatcaataatgctcaatgaacctactatttcctggaagtaggccatggct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taaactctgggatcaataatgctcaatgaacctactatttcctggaagtaggccatggct 500

                                                                       
Query: 301 caagagaaggccaagtaaacagcagtaactaaacactgtactgcatgatgtgctgtaagc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caagagaaggccaagtaaacagcagtaactaaacactgtactgcatgatgtgctgtaagc 560

                                                                       
Query: 361 tttactataaacacatggaataatagaaggaatggcttataggccacttaaaatccacat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 561 tttactataaacacatggaataatagaaggaatggcttataggccacttaaaatccatat 620

                                                                       
Query: 421 tttattcatgtatagagaccatgcttatgtaacgtttaattcttaagcattttaacaaca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tttattcatgtatagagaccatgcttatgtaacgtttaattcttaagcattttaacaaca 680

                                                                       
Query: 481 gctgtttcctctctcagtctttccttttttcaaggaagtttttctttgaaacagggcctc 540
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 681 gctgtttcctctctcagtctttccttttctcaaggaagtttttctttgaaacagggcctc 740

                                                                       
Query: 541 aagtcactcaagctggccttcaacatggcatatagtaaagataaccttcaatttctgatc 600
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 741 aagtcactcaagctggccttcaacatggtatatagtaaagataaccttcaatttctgatc 800

                                                
Query: 601 atcctgatttcacatcctgagtgctgaaattattgat 637
           |||||||||||||||||||||||||||||||||||||
Sbjct: 801 atcctgatttcacatcctgagtgctgaaattattgat 837


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space:   643929
Effective search space used:   643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no131_k07.g1 MSMg01no131_k07.g1 CHROMAT_FILE:
MSMg01no131_k07.g1 PHD_FILE: MSMg01no131_k07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:56 2005
         (305 letters)



>mm_chr1_102377026_102377730
          Length = 705

 Score =  590 bits (305), Expect = e-173
 Identities = 305/305 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   tagagagagacacagagagacttcaagataggaagtaaggtaaacaggaagaggagaatg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 tagagagagacacagagagacttcaagataggaagtaaggtaaacaggaagaggagaatg 627

                                                                       
Query: 61  gggagaagaagagagaaagaggatagggaataagatatggaaagaagaaaaagagtggaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 gggagaagaagagagaaagaggatagggaataagatatggaaagaagaaaaagagtggaa 567

                                                                       
Query: 121 tggataggaaagaagttagagaagagtggagacagaaaaatttaaagatgaagaaagaca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 tggataggaaagaagttagagaagagtggagacagaaaaatttaaagatgaagaaagaca 507

                                                                       
Query: 181 ggagtcagagtcataaggaataagaatgagacagagggaaactgggagggaagaactggg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 ggagtcagagtcataaggaataagaatgagacagagggaaactgggagggaagaactggg 447

                                                                       
Query: 241 aaagagtaaagagtatagatggagtaacagatctcagggagacagtgaggccagacagga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 aaagagtaaagagtatagatggagtaacagatctcagggagacagtgaggccagacagga 387

                
Query: 301 tttag 305
           |||||
Sbjct: 386 tttag 382


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 305
Length of database: 705
Length adjustment: 9
Effective length of query: 296
Effective length of database: 696
Effective search space:   206016
Effective search space used:   206016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)