Query= MSMg01no131_m17.b1 MSMg01no131_m17.b1 CHROMAT_FILE:
MSMg01no131_m17.b1 PHD_FILE: MSMg01no131_m17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:08 2005
(592 letters)
>mm_chr1_87482990_87483981
Length = 992
Score = 1091 bits (564), Expect = 0.0
Identities = 585/592 (98%)
Strand = Plus / Plus
Query: 1 catgagaaaccaagaatttgtgaagggaaaacaagaaccagacatgaggagataaagact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catgagaaaccaagaatttgtgaagggaaaacaagaaccagacatgaggagataaagact 260
Query: 61 tgagcagctggagtattggatcgtttgcctgctatcccagcacttgaaagcatccaggat 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgagcagctggagtattggatcgtttgcctgctatcccagcacttgaaagcatccaggac 320
Query: 121 catggaaagaactgaagtgggagaaaacggacttggaaggcttccaggaagcaatgggga 180
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catggaaagaaccgaggtgggagaaaacggacttggaaggcttccaggaagcaatgggga 380
Query: 181 aaccaatgaatgacagtatcagaaaggtcacagtgtttttatcattattatcattatcat 240
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaccaatggatgacagtatcagaaaggtcacagtgtttttatcattattatcattatcat 440
Query: 241 aattatgacatttatcagtatgtggaggttgggcatatgttccatggtacacatggagag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aattatgacatttatcagtatgtggaggttgggcatatgttccatggtacacatggagag 500
Query: 301 gccaagaaacaacttgtgagtttggtctgttcttccaccatatgggtttcagggatcaaa 360
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 501 gccaagaaacaacttgtgagttgggtctgttcttccaccatatgggtttcagggatcaaa 560
Query: 361 ttcaggtcaccaggcttggtggcaaggacctcgagctagtgagccatttgccagaccaat 420
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgcaggtcaccaggcttggtggcaaggacctcgagctagtgagccatttgccagaccaat 620
Query: 421 gacacattttaattgactggtgacatctcagagtagaagatgggagagcgccaaaggcga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gacacattttaattgactggtgacatctcagagtagaagatgggagagcgccaaaggcga 680
Query: 481 ggtgggaataggtagtcaggtggacatccaacctgcttgccaccatgaggtttaagtgac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggtgggaataggtagtcaggtggacatccaacctgcttgccaccatgaggtttaagtgac 740
Query: 541 agataatggatgttgcctgcctatgatttaccaggaagcattttccttctgg 592
||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 741 agataatggatgttgcctgcctatgatttaccaggaagcattttcattctgg 792
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 992
Length adjustment: 10
Effective length of query: 582
Effective length of database: 982
Effective search space: 571524
Effective search space used: 571524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no131_m17.g1 MSMg01no131_m17.g1 CHROMAT_FILE:
MSMg01no131_m17.g1 PHD_FILE: MSMg01no131_m17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:08 2005
(189 letters)
>mm_chr1_85261736_85262323
Length = 588
Score = 325 bits (168), Expect = 1e-93
Identities = 183/188 (97%), Gaps = 1/188 (0%)
Strand = Plus / Plus
Query: 1 gattgataaccacaacaaaaatgtcttcagagacagaaactgcaaacactcagagacaga 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 201 gattgataaccacaacaaaaatgtcttcaaagacagaaactgcaaacactcagagacaga 260
Query: 61 tacctccacctgcttatatgaaaggcactgagccagtgattaaccaccctatttactccc 120
||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 261 tacctccacctacttatatgaaaggcactgagccagtgattaaccacgctatttattccc 320
Query: 121 aaaagacacagcacactgctggttatcactagtggacttgaccaaatgtcacaggagaaa 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaagacacagcacactgctggt-atcactagtggacttgaccaaatgtcacaggagaaa 379
Query: 181 tggtgctt 188
||||||||
Sbjct: 380 tggtgctt 387
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 189
Length of database: 588
Length adjustment: 8
Effective length of query: 181
Effective length of database: 580
Effective search space: 104980
Effective search space used: 104980
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|