Query= MSMg01no131_o12.b1 MSMg01no131_o12.b1 CHROMAT_FILE:
MSMg01no131_o12.b1 PHD_FILE: MSMg01no131_o12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:16 2005
(591 letters)
>mm_chr1_122156907_122157896
Length = 990
Score = 1073 bits (555), Expect = 0.0
Identities = 582/591 (98%), Gaps = 1/591 (0%)
Strand = Plus / Plus
Query: 1 ggagccctttagcctactgtgtcccagacaaggttgctgggtgatctccagcccccctta 60
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 ggagccctttagcctactgtgtcccagacaaggttgctgggtgatctccaggtcccctta 260
Query: 61 gagtagcagttctgagaggaagggacacttccccaggaaaagacacctgctgggtgaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagtagcagttctgagaggaagggacacttccccaggaaaagacacctgctgggtgaagt 320
Query: 121 ggaaaggagctaacatactctctctgcagttccttagagttctacctgctcccattgggg 180
|||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||
Sbjct: 321 ggaaaggagctaacatactctctctgtagttccttagggttctacctgctcccattgggg 380
Query: 181 ctttgctcaggggaaaacagaggtgcattaaggtgtccatctccagccacagagcctgga 240
|||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 381 ctttgctc-ggggaaaacagaggtgcattaaggtgtccatctctagccacagagcctgga 439
Query: 241 tctctaggagtaaggctttccagaataccacccccagcccaatcaaaactcttgatgtct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tctctaggagtaaggctttccagaataccacccccagcccaatcaaaactcttgatgtct 499
Query: 301 gggctccagttgcttcctccccttccagctctgaccagtcaggacccatccctctaagga 360
||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 500 gggctccagttgcttcctccccttctagctctgaccagtcaggagccatccctctaagga 559
Query: 361 ccatccgagggactcatgtcatcttttacattggctcagtcttcgtgggggcactggttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ccatccgagggactcatgtcatcttttacattggctcagtcttcgtgggggcactggttt 619
Query: 421 gctggacacaaccactgcttccagtttgcttctgacccttgcacaggcaaggctggtcac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gctggacacaaccactgcttccagtttgcttctgacccttgcacaggcaaggctggtcac 679
Query: 481 ccagacaaccgagcactggctccttgtcatatcccacactgttcaggtcaactccaccag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ccagacaaccgagcactggctccttgtcatatcccacactgttcaggtcaactccaccag 739
Query: 541 gagggtctggttcacagccacctagaacaagtttgccctcagagacatcca 591
|||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gagggtctgggtcacagccacctagaacaagtttgccctcagagacatcca 790
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 591
Length of database: 990
Length adjustment: 10
Effective length of query: 581
Effective length of database: 980
Effective search space: 569380
Effective search space used: 569380
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no131_o12.g1 MSMg01no131_o12.g1 CHROMAT_FILE:
MSMg01no131_o12.g1 PHD_FILE: MSMg01no131_o12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:16 2005
(248 letters)
>mm_chr1_122316066_122316714
Length = 649
Score = 451 bits (233), Expect = e-131
Identities = 245/249 (98%), Gaps = 1/249 (0%)
Strand = Plus / Minus
Query: 1 ttctttggat-ccaaattgagacacaggcctgtggagaacctgctgtgtgacgaaggtac 59
|||||||||| ||||||||||||||||||||||||||||||||||| |||| || |||||
Sbjct: 405 ttctttggatcccaaattgagacacaggcctgtggagaacctgctgggtgaggagggtac 346
Query: 60 ttaaggcacattgctaggctttgcttgcccacacaaggcattctagaggtggaaagactc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 ttaaggcacattgctaggctttgcttgcccacacaaggcattctagaggtggaaagactc 286
Query: 120 ttcacaagaccttgatctgctagctaactggcagctatctaacagatatctaccagctcc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 ttcacaagaccttgatctgctagctaactggcagctatctaacagatatctaccagctcc 226
Query: 180 tcctgttccctctcccctcctcccaacacacacacacacacacacacacacacacacaca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 tcctgttccctctcccctcctcccaacacacacacacacacacacacacacacacacaca 166
Query: 240 cacacacac 248
|||||||||
Sbjct: 165 cacacacac 157
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 45
Number of extensions: 23
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 649
Length adjustment: 9
Effective length of query: 239
Effective length of database: 640
Effective search space: 152960
Effective search space used: 152960
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
