Query= MSMg01no131_o21.b1 MSMg01no131_o21.b1 CHROMAT_FILE:
MSMg01no131_o21.b1 PHD_FILE: MSMg01no131_o21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:18 2005
(597 letters)
>mm_chr1_196257651_196258647
Length = 997
Score = 1116 bits (577), Expect = 0.0
Identities = 592/597 (99%)
Strand = Plus / Minus
Query: 1 aatagcagatatggcatctagggagggtttgtattctgtctcagagaggatgccctttgt 60
||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 816 aatagtagatatggcatctagggagggttagtattctgtctcagagaggatgccctttgt 757
Query: 61 tgttccctcacatgatgagaggaatagagtgtgtcctcatttgatgaaggaggtagaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 tgttccctcacatgatgagaggaatagagtgtgtcctcatttgatgaaggaggtagaagg 697
Query: 121 gaccagggtgttctcttggactgttttgtaagaaaactgaaatcagggctttgccttctt 180
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 gaccagggtgttctctaagactgttttgtaagaaaactgaaatcagggctttgccttctt 637
Query: 181 ggattaccactctcctaaaggagcagtttctgaagattaacttgcatattaggttccaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 ggattaccactctcctaaaggagcagtttctgaagattaacttgcatattaggttccaac 577
Query: 241 atacaaattttgaggaggtgctataattctgattagcacaatacttaaaaatactgcaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 atacaaattttgaggaggtgctataattctgattagcacaatacttaaaaatactgcaga 517
Query: 301 aaatatgtaactagccatgtgggcaacaggatgtgttctatatgcatgcatatttacttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 aaatatgtaactagccatgtgggcaacaggatgtgttctatatgcatgcatatttacttg 457
Query: 361 tgtgtatatgtagtcaggattttataggatggattcctctatcattttaaattaatgatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 tgtgtatatgtagtcaggattttataggatggattcctctatcattttaaattaatgatg 397
Query: 421 ggatctctcactgaacctagaattcataggttgtctagattagctagccagcaaacctat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 ggatctctcactgaacctagaattcataggttgtctagattagctagccagcaaacctat 337
Query: 481 gagatcctcctatttccatcttttggatgctaggattctaggcgagtaccaccacacacc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 gagatcctcctatttccatcttttggatgctaggattctaggcgagtaccaccacacacc 277
Query: 541 aatttttataatgtggtataggatccacacccagattctcatgcctgagcactaact 597
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aatttttatagtgtggtataggatccacacccagattctcatgcctgagcactaact 220
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 997
Length adjustment: 10
Effective length of query: 587
Effective length of database: 987
Effective search space: 579369
Effective search space used: 579369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no131_o21.g1 MSMg01no131_o21.g1 CHROMAT_FILE:
MSMg01no131_o21.g1 PHD_FILE: MSMg01no131_o21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:18 2005
(304 letters)
>mm_chr1_196165764_196166467
Length = 704
Score = 551 bits (285), Expect = e-161
Identities = 298/303 (98%), Gaps = 2/303 (0%)
Strand = Plus / Plus
Query: 1 atgcctgctgaaaatgcagctgcttttgttcaacactgacaagctgtgtttggtgggatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 atgcctgctgaaaatgcagctgcttttgttcaacactgacaagctgtgtttggtgggatc 262
Query: 61 cttgggtttaaaacccacagacacagaggcccaactattttttttttattaaaattaagt 120
||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||
Sbjct: 263 cttgggtttaaaacccacagacacagaggcccaacta--tttttcttattaaaactaagt 320
Query: 121 gaaaacttgcttatgagacagaaattggggcttcccttctgtgtgcctgcctgccaggcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaaaacttgcttatgagacagaaattggggcttcccttctgtgtgcctgcctgccaggcc 380
Query: 181 caaaaatgcaagatgggtggaaaaatagtcctggttctcattttggacttgtttctctgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caaaaatgcaagatgggtggaaaaatagtcctggttctcattttggacttgtttctctgc 440
Query: 241 cttgggttacagtattctgctccaagaaatgtcttcaggcatgtctggctcaggaatctt 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttgggttacaatattctgctccaagaaatgtcttcaggcatgtctggctcaggaatctt 500
Query: 301 ttg 303
|||
Sbjct: 501 ttg 503
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 304
Length of database: 704
Length adjustment: 9
Effective length of query: 295
Effective length of database: 695
Effective search space: 205025
Effective search space used: 205025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
