ATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAGAATCCGCGG
AATTCTCTAAATTTTCTCTATGACTCTTAGTCAATGAGCAGATCAGTTCC
TTCATATTTCCTGTGAAAAATCTCCTTTTTATTATTTGGTAGCCTTGCAT
ATACAATGTACTCTTCTTCAACAAAATTGTGGCTTATTTAGGTCCTTCAT
CATGAACAGACAATGTGGCCAGCTTTGAAATCAATCCACAAGGACTGTGT
GCATCTTTAGCATCTGCTCCTCAAAGCAACAGGATATGTTAAATACTTTT
TAAACATTCAAAGCTTCTAAAACCTTCTCTAGGGATCCACCTCACTTTCC
CTAACAACTGTGCCTCCCCTGAAATTGGTGGTTTGGGATGAATGAAAATT
TTATCCAACCTGTTCCTGATAGAGAATCTGAAATCCAGTTCGATTTTTAA
AAATCATATAAACAAAATTATTCCTTACACTATAAAGAACAAATCATGCA
AGTAACACTGAAAATTCAGTATTGAGTCTTCAGTCTTTTCTATAAACAAT
TACAGTCACTTTAAAGCTTAAAAAATAGAATCTGAGTAGTTGAATTAAAC
AAGTATGACAGTAGATTTAAGAGGGATTGGTGGTTACCAGTTCTGAAGGT
TCTTGCAGAGGGCTTGAATTCATTTCCCAGTATGATAATTTACTGACTCA
TAATGGCTTCTT

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXCTCAGTTGAGAATTTTTTGTTTTGCTCT
GTACCCCATTTTTAAATAGGATTATTTGATTCTCTAGATTCTAACTACTT
GAGTTCATTTTACATTTTGGACATTAGCCCTCTATCGGATGCTCTGAAGT
ACAGCTTGAGGTCAGGAATGGTGATTCCAGAAGAAGTTCTTTTATTGTTG
AGAATAGTTTTCACTATCCTAGGATTTTTGTTATTCCAAATGAATTTGCA
AATTTCTTTCTAAGTCAAAGAATAATTGAGTTGGAATTTTGATCAGGATT
GCATTGAATCTGTAGATTGCTTTCAACAACAACAACCTGGCCATTTTTTA
CTATATTAATCCTGTCAATCCCTGAGAATGAGCTATCTTTCCATCTTATG
AGATCTTCTTTGCTTTCTTTCTTTAGGGACTTGAAGTTCTTGTCATACAG
ATGTTGCACTTGCTTAGTTAGAGTCACACCAAGATATTTTATATGACTTG
TGACTACTGTGAAGAGTGTCATTTCCCTAATTTCTTTCTCAGCCTGTTTA
TTCTTTAAGTAGAGGAAGGCCAATGGTTTGTTTGAGGTAATTTTATATCC
AGATACTTCCATGAAGTTGTTTATCAGGTTTAGGAGTTCTCTGG

Query= MSMg01no132_a08.b1 MSMg01no132_a08.b1 CHROMAT_FILE:
MSMg01no132_a08.b1 PHD_FILE: MSMg01no132_a08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:25 2005
         (665 letters)



>mm_chr1_103366792_103367857
          Length = 1066

 Score = 1193 bits (617), Expect = 0.0
 Identities = 650/661 (98%), Gaps = 1/661 (0%)
 Strand = Plus / Minus

                                                                       
Query: 6   ttctctaaattttctctatgactcttagtcaatgagcagatcagttccttcatatttcct 65
           |||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 ttctttaaatttcctatatgactcttagtcaatgagcagatcagttccttcatatttcct 807

                                                                       
Query: 66  gtgaaaaatctcctttttattatttggtagccttgcatatacaatgtactcttcttcaac 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 gtgaaaaatctcctttttattatttggtagccttgcatatacaatgtactcttcttcaac 747

                                                                       
Query: 126 aaaattgtggcttatttaggtccttcatcatgaacagacaatgtggccagctttgaaatc 185
           |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 746 aaaattgtggcttatttaggtctttcatcattaacagacaatgtggccagctttgaaatc 687

                                                                       
Query: 186 aatccacaaggactgtgtgcatctttagcatctgctcctcaaagcaacaggatatgttaa 245
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 aatccacaaggactgtgtgcatctttagcatctgctcctcaaagcaacaggatatgttaa 627

                                                                       
Query: 246 atactttttaaacattcaaagcttctaaaaccttctctagggatccacctcactttccct 305
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 626 atactttttaaacattcaaagcttctaaaaccttctctagggacccacctcactttccct 567

                                                                       
Query: 306 aacaactgtgcctcccctgaaattggtggtttgggatgaatgaaaattttatccaacctg 365
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 aacagctgtgcctcccctgaaattggtggtttgggatgaatgaaaattttatccaacctg 507

                                                                       
Query: 366 ttcctgatagagaatctgaaatccagttcgatttttaaaaatcatataaacaaaattatt 425
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 ttcctgatacagaatctgaaatccagttcgatttttaaaaatcatataaacaaaattatt 447

                                                                       
Query: 426 ccttacactataaagaacaaatcatgcaagtaacactgaaaattcagtattgagtcttca 485
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ccttacactataaagaacaaatcatgcaagtaacactgaaaattcagtattgagtcttca 387

                                                                       
Query: 486 gtcttttctataaacaattacagtcactttaaagcttaaaaaa-tagaatctgagtagtt 544
           |||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||
Sbjct: 386 gtcttttctataaacaattacagtcactttaaagtttaaaaaaatagaatctaagtagtt 327

                                                                       
Query: 545 gaattaaacaagtatgacagtagatttaagagggattggtggttaccagttctgaaggtt 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gaattaaacaagtatgacagtagatttaagagggattggtggttaccagttctgaaggtt 267

                                                                       
Query: 605 cttgcagagggcttgaattcatttcccagtatgataatttactgactcataatggcttct 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 cttgcagagggcttgaattcatttcccagtatgataatttactgactcataatggcttct 207

            
Query: 665 t 665
           |
Sbjct: 206 t 206


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1066
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1056
Effective search space:   691680
Effective search space used:   691680
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)