CAATGGGCTAACTTTTACGGGACCATTCGAGGAAGCNCGCGGAACACGAC
ACCGCAGACCCCCCCNGCCCACCCAAACCACNCAGCCCCCAAAGCAAAAC
NCCCCGCCTTTTCTTACTACTGTCCCTAATGACACGGACGTTTTCAAGCA
AAGCGACCCTACCCAACAGACCCAAACGACGGGCCAAAAAACAAGGNACA
CAAACGCACACACACAGAAAGACAGCAGAANCGGACGGCAGAACCCGACA
CGGAAGAAAAAGAAAAAAGCAAAAAAACNCCGCCACCGCCCGCCGCCCCG
GTTTTGCCCGCCCCCCTCCTCTCCCTCCGCTGCT

ATGATGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXAATGTACTAATCTACAGTTACTGGAAGAA
ATTGCATAAATAATAAAATTTAAACACAGCTACCTTTGTTGTTAAGTGAA
TTTTGATATTTATGAGAAGTCTAAAAAGCTTAGAAAGGTGTGTGAATTCA
GTTGAAATTTCAGCAAGGCTAATAATGTCTAAAACAAAGAAATGGCAGAA
GAAACACTTAAAGATTTCTAAATTTGACTACAATCGTAAGAATTTGAATA
TGTATTAGTAGGTAGGATTATATATGGGTTGTCTGATACTTGTGATTTTT
GAAGTTGCTAGCCTCTATCACTGTTCCCTTCTTCACTTCCAGTCAGATCT
TATTTTTGTATTTACATTAATCTGAAGAAAATAACCAATGTGTTAAAGTC
TTATGAAGGCATAGTATTTGAAGTGGATCAGAGCAAGGCTTGGTTATCAC
AAAGACTGTCTGATATTTGGGGGTGTTGTGCAAAACAGTCGGCGAATCCA
GGCAATGTAACATTCATTTGGCAAATAATTGCTTTCTTTAGTAGAGACAG
CTGCTCTCCTGCCCTTCTGGCTAAAACACACCGAGGAAAGGAAAAAACAT
CCTTGCAAATGAAAATAATGGCGAAATGCTGGCAATACAGTGGAGATCAA
ACAAAATAAGGCTTTAAAACCAAGA

Query= MSMg01no132_g09.g1 MSMg01no132_g09.g1 CHROMAT_FILE:
MSMg01no132_g09.g1 PHD_FILE: MSMg01no132_g09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:54 2005
         (623 letters)



>mm_chr1_110982207_110983229
          Length = 1023

 Score = 1166 bits (603), Expect = 0.0
 Identities = 618/623 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatgtactaatctacagttactggaagaaattgcataaataataaaatttaaacacagct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatgtactaatctacagttactggaagaaattgcataaataataaaatttaaacacagct 260

                                                                       
Query: 61  acctttgttgttaagtgaattttgatatttatgagaagtctaaaaagcttagaaaggtgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acctttgttgttaagtgaattttgatatttatgagaagtctaaaaagcttagaaaggtgt 320

                                                                       
Query: 121 gtgaattcagttgaaatttcagcaaggctaataatgtctaaaacaaagaaatggcagaag 180
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 321 gtgaattcagttgaaatttcagcaagactaataatgtctaaaacaaagaaatggcagaag 380

                                                                       
Query: 181 aaacacttaaagatttctaaatttgactacaatcgtaagaatttgaatatgtattagtag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaacacttaaagatttctaaatttgactacaatcgtaagaatttgaatatgtattagtag 440

                                                                       
Query: 241 gtaggattatatatgggttgtctgatacttgtgatttttgaagttgctagcctctatcac 300
           ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 441 gtaggattatatatgggttgtcttatatttgtgatttttgaagttgctagcctctatcac 500

                                                                       
Query: 301 tgttcccttcttcacttccagtcagatcttatttttgtatttacattaatctgaagaaaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgttcccttcttcacttccagtcagatcttatttttgtatttacattaatctgaagaaaa 560

                                                                       
Query: 361 taaccaatgtgttaaagtcttatgaaggcatagtatttgaagtggatcagagcaaggctt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taaccaatgtgttaaagtcttatgaaggcatagtatttgaagtggatcagagcaaggctt 620

                                                                       
Query: 421 ggttatcacaaagactgtctgatatttgggggtgttgtgcaaaacagtcggcgaatccag 480
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 621 ggttatcacaaagactgtctgatatttgggggtgttgtgcaaaacagttggcgaatccag 680

                                                                       
Query: 481 gcaatgtaacattcatttggcaaataattgctttctttagtagagacagctgctctcctg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gcaatgtaacattcatttggcaaataattgctttctttagtagagacagctgctctcctg 740

                                                                       
Query: 541 cccttctggctaaaacacaccgaggaaaggaaaaaacatccttgcaaatgaaaataatgg 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cccttctggctaaaacacaccgaggaaaggaaaaaacatccttgcaaatgaaaataatgg 800

                                  
Query: 601 cgaaatgctggcaatacagtgga 623
           ||||||| |||||||||||||||
Sbjct: 801 cgaaatgttggcaatacagtgga 823


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 623
Length of database: 1023
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1013
Effective search space:   620969
Effective search space used:   620969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)