NCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAGAATCCGCG
GAATTCAAGAAGATGGTCCCAAGAAAATCAAATAACCCTATTAAAAAATG
GGGCACACAGCTAAACATGAATTCTTAACTGAGGAATACCCAATGGCTGA
GACGCACCTGAAAAAATGTTCAAAATCCTTAATCATCAGGGAAATGCAAA
TCAAAACAACCCTGAAATTCCACCTCACACCAGTCAGAATGGCTAAAATC
AAAAATTCAGGTGACAGCTGATGCTGGTGAGGATGTGGAAAAAGAGGAAC
ACTCCTCCATTGTTGGTAGGATTGCAAGCTGGTACAACCACTTTGGATAT
CAGTCTGGCAGTTCCTCAGAAAACTGGACATAGTACTACCAGAAGATCCA
GCAACACCTCTCCTGGGCATATACCCAGAAGATGTTCCAACTTGTAATAA
AGACACATACTCTTCTTTCCAGAAGCTGGAAAGAACCCAGATTTCCCTCA
ATAGAGGAATGGATACAGAAAATGTGGTACATTTACACAATGGAGTACTA
CTCAGCCATTAAAAACAATGAATTTATGAAATTTTTAGGCAAATGGATGG
ATCTGGAGGATATCATCTTGAGTGAGGTAACCCAATCACAAAAGAAGACA
CATGATATGCACTCATACATAAGTGGATTATTACCCAAAAACTTAGACTA
CCCAAGATACAAGTTGCAAAACACATGAAA

AATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXCTCACACAGAGAGTCTCAGGGCACTTTCC
TTCCATTAAGCATTTTGACAAGTGAGCTATTTATTAGTTATATGATGTTT
TGGCATGGACTATTTTTCTTGTGAACAGTTTGGACTGGAGACACAGTGAA
CATGAGGCCCTGTGTTCCATCACGAGACAGACAAGAGGAGTGTGGAAGAA
CAATTGAAAAAAAAATAGGTGGTAACGTTTGGGAAATTCTATTATACCCC
AGAATTTCCTGGCCGAGTATTTAGTAACAGGAAGGATTAATGTTTTTGAG
TGACAGACTACATGTCTGCCATGCCCTCTCTTAGACTCTACAAGGTAAGC
TGTAAAAACAGTTCCAGACAAAGGCTGTAATTGACAGACATCAATAAGAT
GGGATTGGTTGGAAGAACACTGAGGGTCTGTGAGAGTCAGGTTCTCTCGC
AGAACCTGCTGATTTCAGTGTATGGCATGGAGATGATCTTTTCCTTCTGG
ATGATACTTAAAAATTTAGAATGGTAACAGGGCAAAAGGACGAAGGCCAT
ACATCTCACAGCAACTCTTGCATGGTTTTCTTATTTCTCAGAATATTGTT
GTTTTTATTTTTGAACAATATTTTTTTGCTGTTAAATGTAATTTATAGTT
TAAGGTGTTAAATTAATACTCA

Query= MSMg01no132_g19.g1 MSMg01no132_g19.g1 CHROMAT_FILE:
MSMg01no132_g19.g1 PHD_FILE: MSMg01no132_g19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:56 2005
         (651 letters)



>mm_chr1_55523781_55524831
          Length = 1051

 Score = 1077 bits (557), Expect = 0.0
 Identities = 569/573 (99%), Gaps = 2/573 (0%)
 Strand = Plus / Plus

                                                                       
Query: 80  tggcatggactatttttcttgtgaacagtttggactggagacacagtgaacatgaggccc 139
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 tggcatggactatttttcttgtgaacagtttggactggagacacagtgaacatgaggccc 339

                                                                       
Query: 140 tgtgttccatcacgagacagacaagaggagtgtggaagaacaattgaaaaaaaaataggt 199
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 340 tgtgttccatcacgagacagacaagaggagtgtggaagaacaattg-aaaaaaaataggt 398

                                                                       
Query: 200 ggtaacgtttgggaaattctattataccccagaatttcctggccgagtatttagtaacag 259
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 ggtaacatttgggaaattctattataccccagaatttcctggccgagtatttagtaacag 458

                                                                       
Query: 260 gaaggattaatgtttttgagtgacagactacatgtctgccatgccctctcttagactcta 319
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 gaaggattaatgtttttgagtgacagactacatgtctgccatgccctctcttagactcta 518

                                                                       
Query: 320 caaggtaagctgtaaaaacagttccagacaaaggctgtaattgacagacatcaataagat 379
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 519 caaggtaagctgtaaaaacagttccagagaaaggctgtaattgacagacatcaataagat 578

                                                                       
Query: 380 gggattggttggaagaacactgagggtctgtgagagtcaggttctctcgcagaacctgct 439
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 gggattggttggaagaacactgagggtctgtgagagtcaggttctctcgcagaacctgct 638

                                                                       
Query: 440 gatttcagtgtatggcatggagatgatcttttccttctggatgatacttaaaaatttaga 499
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 gatttcagtgtatggcatggagatgatcttttccttctggatgatacttaaaaatttaga 698

                                                                       
Query: 500 atggtaacagggcaaaaggacgaaggccatacatctcacagcaactcttgcatggttttc 559
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 atggtaacagggcaaaaggacgaaggccatacatctcacagcaactcttgcatggttttc 758

                                                                       
Query: 560 ttatttctcagaatattgttgtttttatttttgaacaatattttttt-gctgttaaatgt 618
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 759 ttatttctcagaatattgttgtttttatttttgaacaatattttttttgctgttaaatgt 818

                                            
Query: 619 aatttatagtttaaggtgttaaattaatactca 651
           |||||||||||||||||||||||||||||||||
Sbjct: 819 aatttatagtttaaggtgttaaattaatactca 851


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1051
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1041
Effective search space:   667281
Effective search space used:   667281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)