Query= MSMg01no133_p07.b1 MSMg01no133_p07.b1 CHROMAT_FILE:
MSMg01no133_p07.b1 PHD_FILE: MSMg01no133_p07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:48:54 2005
(336 letters)
>mm_chr1_154907142_154907876
Length = 735
Score = 530 bits (274), Expect = e-155
Identities = 321/342 (93%), Gaps = 13/342 (3%)
Strand = Plus / Minus
Query: 1 ggctggtctcaaacttacagagacccacctgcttctgcctccccagggctgggattaagg 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 617 ggctggtctcaaacttacagagatccacctgcttctgcctccccagggctgggattaagg 558
Query: 61 tgcgtgccaccactgcccagtttgagggttgtgatgttaatagaaaaaactcagcaggtg 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 cgcgtgccaccactgcccagtttgagggttgtgatgttaatagaaaaaactcagcaggtg 498
Query: 121 ctgaggtactggagctcagtcgtatatagtgcttacctggtatcgcaaggaaggctctgc 180
|||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 497 ctgaggtactggagctcagtcgtatatagtgcttacctggtatcacaagg----ctctgc 442
Query: 181 ctgagagcagtcccagcactgcatgcccaaaccaacccaaaccctgtaacagtgcgccag 240
| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 441 ccgagagcagtcccagcactgcatgcccaaaccaacccaagccctgtaacagtgcgccag 382
Query: 241 ccctcagatgat-actggc-----cttatctttagtttctggggcagtaacatctcaggg 294
|||||||| ||| | | | |||||||||||||||||| |||||||||||||||||
Sbjct: 381 ccctcagaggatta-t--ctttatcttatctttagtttctggagcagtaacatctcaggg 325
Query: 295 gaggatggcaaagtgggacaaggaaaactaaaacaaactaac 336
||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 324 gaggatggcaaagtgcgacaaggaaaactaaaacaaactaac 283
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 336
Length of database: 735
Length adjustment: 9
Effective length of query: 327
Effective length of database: 726
Effective search space: 237402
Effective search space used: 237402
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no133_p07.g1 MSMg01no133_p07.g1 CHROMAT_FILE:
MSMg01no133_p07.g1 PHD_FILE: MSMg01no133_p07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:48:55 2005
(230 letters)
>mm_chr1_154773371_154774000
Length = 630
Score = 429 bits (222), Expect = e-125
Identities = 228/230 (99%)
Strand = Plus / Plus
Query: 1 cttccagatcgtggagattgcaggtataaaccaccatacacaagttgaatagccacctag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttccagatcgtggagattgcaggtataaaccaccatacacaagttgaatagccacctag 260
Query: 61 gctctaggctacatgagatattgtctcaaaatttaaaaaaagaagaagaaagagagaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctctaggctacatgagatattgtctcaaaatttaaaaaaagaagaagaaagagagaata 320
Query: 121 aaatgataaaaggacctataagatggcttctctaaggtgtttatagccaagcctgaaggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaatgataaaaggacctataagatggcttctctaaggtgtttatagccaagcctgaaggc 380
Query: 181 ccaagtttaatctcataatccccggcagaggtaggcggatttctgagttt 230
||||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 381 ccaagtttaatctcagaatccccggcagaggcaggcggatttctgagttt 430
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 230
Length of database: 630
Length adjustment: 9
Effective length of query: 221
Effective length of database: 621
Effective search space: 137241
Effective search space used: 137241
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
