Query= MSMg01no134_n17.b1 MSMg01no134_n17.b1 CHROMAT_FILE:
MSMg01no134_n17.b1 PHD_FILE: MSMg01no134_n17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:50:41 2005
(337 letters)
>mm_chr1_69385833_69386569
Length = 737
Score = 609 bits (315), Expect = e-179
Identities = 333/341 (97%), Gaps = 4/341 (1%)
Strand = Plus / Plus
Query: 1 gccctagaacaaatacccaagtatacctaagaattattatatacctaagtattattactt 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 201 gccctagaacaaatacccaagtatacctaagtattattatatacctaagtattattactt 260
Query: 61 tctcccaagccatgtgagaatttcatatagtgtgtgctcacatagaaataatttataatt 120
|||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| |
Sbjct: 261 tctcccaagccatgtgagcatttcatacagtgtgtgctcacatagaaataatttataact 320
Query: 121 catgtgaattgtagttgtaattgtaacaattgtaattgtcctgtctagttttatgccaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catgtgaattgtagttgtaattgtaacaattgtaattgtcctgtctagttttatgccaac 380
Query: 181 tttatataagatagaggcacctaaaaggggtgaacctcaattgaaaaaaa----tgtctt 236
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 381 tttatataagatagaggcacctaaaaggggtgaacctcaattgaaaaaaaaaaatgtctt 440
Query: 237 cataatatccaactataatgcattttcttaattagtaaccaatgtgggaggtctcaacct 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cataatatccaactataatgcattttcttaattagtaaccaatgtgggaggtctcaacct 500
Query: 297 attgtgggtggtgccatccctgggctggtggtgatgagttc 337
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 attgtgggtggtgccatccctgggctggtggtgatgagttc 541
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 737
Length adjustment: 9
Effective length of query: 328
Effective length of database: 728
Effective search space: 238784
Effective search space used: 238784
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no134_n17.g1 MSMg01no134_n17.g1 CHROMAT_FILE:
MSMg01no134_n17.g1 PHD_FILE: MSMg01no134_n17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:50:42 2005
(685 letters)
>mm_chr1_69442952_69444036
Length = 1085
Score = 1307 bits (676), Expect = 0.0
Identities = 682/684 (99%)
Strand = Plus / Minus
Query: 2 ttaccctagagaagccaactgtatatgatgtgttcacccaataagagtcaattataagaa 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 885 ttaccctagagaagccaactgtatatgatgtgttcacccaataagagtcaattataagaa 826
Query: 62 atggaaatattaatatgtctagacacagtagcacagagaactgatgatctatgaggaagg 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 atggaaatattaatatgtctagacacagtagcacagagaactgatgatctatgaggaagg 766
Query: 122 cagtaaaggaccaattacagtttgccaggcaaacaaaaggaaagtaaaggcacacatgta 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 cagtaaaggaccaattacagtttgccaggcaaacaaaaggaaagtaaaggcacacatgta 706
Query: 182 gacacacatgtatcaggcttcagtaggggggtggtcaataatttcctgatatggtaaaga 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 gacacacatgtatcaggcttcagtaggggggtggtcaataatttcctgatatggtaaaga 646
Query: 242 aaaagatgaggacagtaaagatccatggatacatggctgtatggcaaggtcagtgataaa 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 aaaagatgaggacagtaaagatccatggatacatggctgtatggcaaggtcagtgataaa 586
Query: 302 gtaagctaaagaagtacctccccttttaagttgtatagttgttttcaccaagttggaaag 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 gtaagctaaagaagtacctccccttttaagttgtatagttgttttcaccaagttggaaag 526
Query: 362 cttgacaagaaaaagattagaatattacatccatgggcctaatcttgtgcagatatcatg 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 cttgacaagaaaaagattagaatattacatccatgggcctaatcttgtgcagatatcatg 466
Query: 422 tgggtaaccctgagtgttaaatgttaataggctactaaggatttcatattcagggcacat 481
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 465 tgggtaaccctgagtgttaaatgttaagaggctactaaggatttcatattcagggcacat 406
Query: 482 tgttatgtaataccataactttacaatcataaacttttaatttatgctataataattttc 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 tgttatgtaataccataactttacaatcataaacttttaatttatgctataataattttc 346
Query: 542 attttcaatgtttattccaatgatcttgtgttgtttctttagatatgttaaggttttgct 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 attttcaatgtttattccaatgatcttgtgttgtttctttagatatgttaaggttttgct 286
Query: 602 ctcagttgatacgtgcagtacatggcaatttcttcatcaatggataaacattatatttag 661
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 285 ctcagttgatacgtgcagtacatggcaatttcttcatcaatggataaacatgatatttag 226
Query: 662 cataggcgaatcacaggaaaaatg 685
||||||||||||||||||||||||
Sbjct: 225 cataggcgaatcacaggaaaaatg 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 685
Length of database: 1085
Length adjustment: 10
Effective length of query: 675
Effective length of database: 1075
Effective search space: 725625
Effective search space used: 725625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
