Query= MSMg01no134_n21.b1 MSMg01no134_n21.b1 CHROMAT_FILE:
MSMg01no134_n21.b1 PHD_FILE: MSMg01no134_n21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:50:43 2005
(391 letters)
>mm_chr1_25571320_25572112
Length = 793
Score = 659 bits (341), Expect = 0.0
Identities = 378/391 (96%), Gaps = 4/391 (1%)
Strand = Plus / Minus
Query: 4 cttcaggttaaggacttaatttctacttccatttcttggttaatatgaagatgataatcc 63
|||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 593 cttcaggttaaggacttaatttctactttcatttcttggttaatatgaagatgaaaatcc 534
Query: 64 agttctcctcaaaattagcaagatatttgaataatttaa--actgtataatttgaatggt 121
||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 533 agttctcctcaaaattagcaagatatttgaataatttaaacactttataatttgaatggt 474
Query: 122 tgttc-atggtggaaatacaggcacacaacttaaaacagatgaagtgaattttcttcaag 180
||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 tgttcga-ggtggaaatataggcacacaacttaaaacagatgaagtgaattttcttcaag 415
Query: 181 aagactgtaaatataactgggatattggtatatacctatagttgtaccatttgtgggggt 240
||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||
Sbjct: 414 aagactgtaaatataactgggatattggtatatgcctatagttgtaccatttctgggggt 355
Query: 241 ggaccagaaggactgaatattccaagtccaactgagctatatattacggatctatttcaa 300
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 354 ggaccagaaggactgaatattccaagtccaactgagctatatattacaaatctattccaa 295
Query: 301 ataaacaaacaaaataccacatgaaactcatttattttaaatcttagcaacagaataaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 ataaacaaacaaaataccacatgaaactcatttattttaaatcttagcaacagaataaat 235
Query: 361 tcttcacaggaataagtaagtctcatgtctg 391
|||||||||||||||||||||||||||||||
Sbjct: 234 tcttcacaggaataagtaagtctcatgtctg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 391
Length of database: 793
Length adjustment: 9
Effective length of query: 382
Effective length of database: 784
Effective search space: 299488
Effective search space used: 299488
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no134_n21.g1 MSMg01no134_n21.g1 CHROMAT_FILE:
MSMg01no134_n21.g1 PHD_FILE: MSMg01no134_n21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:50:43 2005
(332 letters)
>mm_chr1_25511728_25512460
Length = 733
Score = 547 bits (283), Expect = e-160
Identities = 320/333 (96%), Gaps = 3/333 (0%)
Strand = Plus / Plus
Query: 1 aaacagcatgtcaggacctgatccttataaggtaggggagtctctggcagatctgggcaa 60
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 aaacagcatgttgggacctgatccttataaggtaggggagtctctggcagatctgggcaa 262
Query: 61 tttaccctggcatatcaactgagcttataaagcactacagtacttgtgagccaataaaaa 120
|||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 263 tttagcctggcatatcaactgagcttataaagcactacagaacttgtgagccaat--aaa 320
Query: 121 aaaaatgaagatacagaaagaataacagacaagggagactatcacttactcataagcaaa 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaaatgaagatatagaaagaataacagacaagggagactatcacttactcataagcaaa 380
Query: 181 tgggacaagctgttcattgagttggagtatatttaagatggatgtttggaagggacactg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgggacaagctgttcattgagttggagtatatttaagatggatgtttggaagggacactg 440
Query: 241 cagctatcctgtgtggccagtggacagttt-aagccagggtacaatgtctggagcctctc 299
||||| ||||||||||| |||||||||||| |||||||||| ||||||||||| ||||||
Sbjct: 441 cagctgtcctgtgtggctagtggacagtttgaagccagggtccaatgtctggaccctctc 500
Query: 300 agattccgggtccagccatgggaggagtagaga 332
||||||| |||||||||||||||||||||||||
Sbjct: 501 agattccaggtccagccatgggaggagtagaga 533
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 733
Length adjustment: 9
Effective length of query: 323
Effective length of database: 724
Effective search space: 233852
Effective search space used: 233852
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
