CTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCATATATAAGCCAGTCCTGCTGTGTTTAGAAGGTTTTGTTTGCT
CGGTGTTCTCCAGCCCCACTGACTCTTCTGCCTTCTTTTCTGCATAGCTC
CCTGATCCCTGAGGGAAGGGATTTAATAGACACATCCCATCTAGGACTGA
GCATCCCAAGGTCTCTCACTCTCTGCACATTGTCTGAGGTCTCTGTACAT
TGTTACATGGTGAGTCTTTGATGCTGTTCCCATCTGCTTCAGGAGGAAGC
TTCTCTGATGCTGGCTGATCCATGAGTATAGCAGAGAGCCATGAGGAATC
CTTTTAGTGATTACATTTACATTCCTTTAGCAGAACAGTTGTATTTCGTT
TTCCTCTAAGTCCCTGGCCTATCTAGTCTCAGGCTCTTGGCCATGGAAAC
AGAGTCGGGCATGGCTTTCATCTCGTAGAGTGGGCCTTAAATCCAAGAAG
AAAGTGGCTGGTTACTTCCACAACCTTTGTGCCTCTAATGCACCATCATA
TCCTGCAGCCAGAACACCATTGTAGACTGCAGGGTTTGTAGGTGAATTGG
TGGCATGCGGAGTGTCTTCTCTGGTGGCATGTAAGGTGTGTACCTTACAG
TACCATGAACACTAGTCAGTAGGGATGGAAGAGTCTAGGTAGGTATCAGC
TTGACTTCTCCATG

ATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXATCTCAGTGCCAGCGAAATAGCCATG
TTTTTTTTTTTTTGATAATTACCTTTCATAATGGAAATTCAATGTCTTAA
AAACAATTTTTGTTTGTTTGTTTTGCATAGGAAAAGCCACAGATCAAGGG
CTAATTAAATAACATTGGATAAAAGCTATAATATAATTTTCAAAGTTTAG
GAAAGAGCACAATGTTTGAATTGTTTTGTATCTCGTGACACAAAACAGTG
TTTTAACGTCTCCTATTGTTTTCTTATGAACTAGTCTCCTAAAAGGTGTT
GAAATCGAGGAACCTTCCCCTTTTGAAAAGATTTTAGACTTTAGAGCCGT
GGTTCTCAGCCTTCCCAGTGCTGTGACCCTTTAATACAGTTAATTCTGCT
GTGGTGACCCCCAGCCATAAAGTAATTTTCATTGCTACTTCTTAACTGTA
ATTTTGCTACTTTCATGAACAGAAATGTGAATATCTGATATTTCTGATGG
TCTTAGATGACCCCTGTGAAAGAGCCATTCAGCCTCCCAAAGGGGTTGAG
ACCCACAGATCGGGAACAGCTGTGCTAGAGCATTTATAGTCACTGAAGTA
ACCCTGGGAATCACAGGGAGGGAAGCAGTATGATAGAGGAGAAACCAAAT
AGCTGATAAATAGATTTG

Query= MSMg01no135_e03.g1 MSMg01no135_e03.g1 CHROMAT_FILE:
MSMg01no135_e03.g1 PHD_FILE: MSMg01no135_e03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:51:20 2005
         (632 letters)



>mm_chr1_153477642_153478677
          Length = 1036

 Score = 1139 bits (589), Expect = 0.0
 Identities = 623/637 (97%), Gaps = 6/637 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atctcagtgccagcgaaatagccatg-----tttttttttttttgataattacctttcat 55
           ||||||||||||||||||||||||||     |||||||||||||||||||||||||||||
Sbjct: 201 atctcagtgccagcgaaatagccatgttttttttttttttttttgataattacctttcat 260

                                                                       
Query: 56  aatggaaattcaatgtcttaaaaacaatttttgtttgtttgttttgcataggaaaagcca 115
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 261 aatggaaattcaatgtcttaaaaacaatttttgtttgtttgttttgcatagaaaaagcca 320

                                                                       
Query: 116 cagatcaagggctaattaaataacattggataaaagctataatataattttcaaagttta 175
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 321 cagatcaagggctaattaaataacactggataaaagctataatataattttcaaagttta 380

                                                                       
Query: 176 ggaaagagcacaatgtttgaattgttttgtatctcgtgacacaaaacagtgttttaacgt 235
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 381 ggaaagagcacaatgtttgaattgttttgtatctcgtgacacaaagcagtgttttaacgt 440

                                                                       
Query: 236 ctcctattgttttcttatgaactagtctcctaaaaggtgttgaaatcgaggaaccttccc 295
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctcctattgttttcttatgaactagtctcctaaaaggtgttgaaatcgaggaaccttccc 500

                                                                       
Query: 296 cttttgaaaagattttagactttagagccgtggttctcagccttcccagtgctgtgaccc 355
           |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 501 cttttg-aaagattttagactttagagccgtggttctcagccttcccagcgctgtgaccc 559

                                                                       
Query: 356 tttaatacagttaattctgctgtggtgacccccagccataaagtaattttcattgctact 415
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tttaatacagttaattctgctgtggtgacccccagccataaagtaattttcattgctact 619

                                                                       
Query: 416 tcttaactgtaattttgctactttcatgaacagaaatgtgaatatctgatatttctgatg 475
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tcttaactgtaattttgctactttcatgaacagaaatgtgaatatctgatatttctgatg 679

                                                                       
Query: 476 gtcttagatgacccctgtgaaagagccattcagcctcccaaaggggttgagacccacaga 535
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gtcttagatgacccctgtgaaagagccattcagcctcccaaaggggttgagacccacaga 739

                                                                       
Query: 536 tcgggaacagctgtgctagagcatttatagtcactgaagtaaccctgggaatcacaggga 595
           |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||
Sbjct: 740 tcgggaacagctgtgctagagcatttatagtcgctgaagtaaccctgggaatcataggga 799

                                                
Query: 596 gggaagcagtatgatagaggagaaaccaaatagctga 632
           | |||||||||||||||||||||||||||||| ||||
Sbjct: 800 gtgaagcagtatgatagaggagaaaccaaataactga 836


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1036
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1026
Effective search space:   638172
Effective search space used:   638172
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)