Query= MSMg01no136_a11.b1 MSMg01no136_a11.b1 CHROMAT_FILE:
MSMg01no136_a11.b1 PHD_FILE: MSMg01no136_a11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:17 2005
(628 letters)
>mm_chr1_133612414_133613441
Length = 1028
Score = 1058 bits (547), Expect = 0.0
Identities = 580/591 (98%), Gaps = 1/591 (0%)
Strand = Plus / Minus
Query: 5 gaattcagcccatcagccttggcatcaaggctaagtcctggtggatcctgatcacgcttc 64
|||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 590 gaattcagcccatcagccttggcatcaaggctaagtcctggtgggtcctgatcacacttc 531
Query: 65 tctctacttcttttccctcctctctctctccctctcttctaccaattgttatttcctttc 124
||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 530 tctctacttctttcccctcctctctctctccctctcttctaccaattgtcatttcccttc 471
Query: 125 cttttaattgttggttgagtaatacatttaaagacctgggagttcaaaatgaaggcctat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 cttttaattgttggttgagtaatacatttaaagacctgggagttcaaaatgaaggcctat 411
Query: 185 accttgtaaagacttgatcctgcctgcccagactttcccatgaaaggtaacccacattta 244
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 accttggaaagacttgatcctgcctgcccagactttcccatgaaaggtaacccacattta 351
Query: 245 ctaatttctcacctatcctcctaaattctccttatgtagaagttgttatgcaaactttct 304
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 ctaatttctcacttatcctcctaaattctccttatgtagaagttgttatgcaaactttct 291
Query: 305 atggtagactacataaggtattatatacatgattctgccgctgaattccagtacaccctg 364
|||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 290 atggtagactacataaggtattatatacatgattttgctgctgaattccagtacaccctg 231
Query: 365 gattaagaacaactgtgttcttaaacggctggagagatggctcagcggttaagagcacgg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 gattaagaacaactgtgttcttaaacggctggagagatggctcagcggttaagagcacgg 171
Query: 425 actgctcttccagaggtctgagtttagttcccaacaaccacatgatggttcacaaccatc 484
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 170 actgctcttccagaggtctgagtttagttcccaacaaccacatggtggttcacaaccatc 111
Query: 485 tgtaatgggatctgacgccctcttctggtgtgtctgaagatagtgacagtgtgctcatat 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 tgtaatgggatctgacgccctcttctggtgtgtctgaagatagtgacagtgtgctcatat 51
Query: 545 acattgaaaaaaaaatcttaaaaaaaaaaaaaagaatagctgtgtgcaggg 595
||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 50 acattgaaaaaaaaatctt-aaaaaaaaaaaaagaatagctgtgtgcaggg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1028
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1018
Effective search space: 629124
Effective search space used: 629124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no136_a11.g1 MSMg01no136_a11.g1 CHROMAT_FILE:
MSMg01no136_a11.g1 PHD_FILE: MSMg01no136_a11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:17 2005
(600 letters)
>mm_chr1_133471225_133472224
Length = 1000
Score = 1091 bits (564), Expect = 0.0
Identities = 591/600 (98%)
Strand = Plus / Plus
Query: 1 cagatatggagactagggtttcagccagaatttggctctctgtgcatagaaatgccccct 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 201 cagatatggagactagggtttcagccagaatttggctctctgtgcatagaaatgcctcct 260
Query: 61 gggtacataaactacacaccacgtgtagatctagtgttttcatgtgtagaccgtgtggac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gggtacataaactacacaccacgtgtagatctagtgttttcatgtgtagaccgtgtggac 320
Query: 121 tttgagtacccagacatgacatacattgcaaagtatataaaacctttctcctagttcata 180
|||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 321 tttgagtacccagacatgacatacattgcaaagtatatgaaacctttctcccagttcata 380
Query: 181 atttactgctcttttatggcagtttgatagaacctgagttttatctggtcaaccaaacac 240
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 381 atttactgctcttttatggcagtttgatagaacctgagtttcatctggtcaaccaaacac 440
Query: 241 tgaacttgccatctaggcctagaatcttgccttccaggcatggaatctgcatttgtatgc 300
|||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||
Sbjct: 441 tgaacttgccatctaggcctagaatcttgccttccaagcatggagtctgcatttgtatgc 500
Query: 301 acaaagacaaggttcacaggtcagtgagcctgatctgtacaacagcaaccacaagatcat 360
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 501 acaaagacaaggttcacaggtcagtgagcctgatctgtagaacagcaaccacaagatcat 560
Query: 361 ttggaaaagcagaagcacagggacaacaacccagggcttatgactggcattggaagtggg 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctggaaaagcagaagcacagggacaacaacccagggcttatgactggcattggaagtggg 620
Query: 421 aaaaacattcttgaaggctgagtcccccccacccccaatctgaagcatctgatgctctct 480
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaaaacattcttgaaggctgaggcccccccacccccaatctgaagcatctgatgctctct 680
Query: 481 ccaaatcacttctgaacaagcttatattagaggacactctgttgttacttgctatagaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ccaaatcacttctgaacaagcttatattagaggacactctgttgttacttgctatagaat 740
Query: 541 tgtgtgcttgcttgtctggtgtgtggcgacacttatctatttatacatagtctctgctaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgtgtgcttgcttgtctggtgtgtggcgacacttatctatttatacatagtctctgctaa 800
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 600
Length of database: 1000
Length adjustment: 10
Effective length of query: 590
Effective length of database: 990
Effective search space: 584100
Effective search space used: 584100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
