NNNNTTATCTATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCTTTGTTTAGCTCTGAGCCCCATTTTTAATGGAGTTATTT
GATTTTCTGGGGTCCAGCTTCTTGAGCTCTTTGTATATATTGGATATTAG
TCCCCTATCTGATTTAGGATAGGTAAAGATCCCCAATCTGTTGGTGGCCT
TTTTGTCTTATCAACCTTGTCTTTTGCCTTACANAANCTTTTGATATAGA
CTGATCATACGACTGGTNGGTCGGCATCGTCCATCAAGTCGCTTAGGCCT
TAATCAAGAAATATTCTCCCCCCCCCTTTATTTTTTTTCCCAAAAAGGGG
CGCCCCTTCCTTGTCCAATATTTCCNGGGGCTCCCAAAAAACNNCNAAAC
CCAAAAAATTTTNNNNNNNNCCCCCCCNNNNNNNNNNNNNNNNNNNNNNC
CCNCNCCCCCCCCCCCCTGGGGNNNNNNNTCNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNANTGNNNNNNNNNNNNNNCNNTNCNTTTTTT
TTCTGGGGGGGGGGGGGGGGGGGCGGGGGGGGGCTGGGGGGGGGTGGGGG
GGGGGGGGGGGGGGGGGGGGGAGGGCTGGNNNNNNNNNNNNNNNNNNANA
ANTAANNNNCTTNNNNNNNNNANNNANAANAANNNNAAAAANNNNANNNA
ANAAANAAAAAAAAAANANAAAAAAAACCANNNNAAANNNAAANNANAAA
ANTTTAAGTATATTTG

AGTANNNCCGATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTATAAGATGCGTAAGTAATT
TACCCCAAAGGAGGGCAGTAGGAGCCGGTTATCCTTTATAAGAGATGGTT
GCAGCTGCCACCATCACCAGGCAGTGTTTGCACATGAATGGCATCCCTCT
CTCCCCAAACCTGGGATTTGGCTTCAAAATCTTCTGTTTTCATAGAACAC
TCCAGGGAGTTACGGGAAAGCTGGCAGCCTGGATGCTCAGATCCCCAAAG
CATGGTCTGAAGGGGGCAGCAACCCCCAGAGGCTGCCGGACACTTATGTC
CCCAGTCGTTCACCTCTGGCTGATGATGATTGAGGATTTCAAAATGACTG
ATAGAAAGGTAGATAATAAATATACCATTCAATACTTGATCACAGTGCCA
CATTGGCATCCACTGAAATTGCACATATGTCTCTGATTATGTGCAATTCT
CAGGTGTGAATTAAAATCTTTACATGTGAAATCCCTACTAAATATATTTC
TTTAAAGTATTTTTCCTTATTTGTTTTAATTATGTCGATGTTTGGGGTAT
GGTATGTGCACATAAGTGTAGATATCTATGGGAAGCAGAGGAGTGCAGTG
AATCCCCTGGAGCTGGGGTTACAAGTGCATCCTGGGAACTGAACCCCA

Query= MSMg01no136_i24.g1 MSMg01no136_i24.g1 CHROMAT_FILE:
MSMg01no136_i24.g1 PHD_FILE: MSMg01no136_i24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:59 2005
         (619 letters)



>mm_chr1_188116609_188117627
          Length = 1019

 Score = 1166 bits (603), Expect = 0.0
 Identities = 615/619 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctataagatgcgtaagtaatttaccccaaaggagggcagtaggagccggttatcctttat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctataagatgcgtaagtaatttaccccaaaggagggcagtaggagccggttatcctttat 260

                                                                       
Query: 61  aagagatggttgcagctgccaccatcaccaggcagtgtttgcacatgaatggcatccctc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagagatggttgcagctgccaccatcaccaggcagtgtttgcacatgaatggcatccctc 320

                                                                       
Query: 121 tctccccaaacctgggatttggcttcaaaatcttctgttttcatagaacactccagggag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctccccaaacctgggatttggcttcaaaatcttctgttttcatagaacactccagggag 380

                                                                       
Query: 181 ttacgggaaagctggcagcctggatgctcagatccccaaagcatggtctgaagggggcag 240
           |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 381 ttaccggaaagctggcagcctggatgctcagatccccaaagcatggtctgaagcgggcag 440

                                                                       
Query: 241 caacccccagaggctgccggacacttatgtccccagtcgttcacctctggctgatgatga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caacccccagaggctgccggacacttatgtccccagtcgttcacctctggctgatgatga 500

                                                                       
Query: 301 ttgaggatttcaaaatgactgatagaaaggtagataataaatataccattcaatacttga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgaggatttcaaaatgactgatagaaaggtagataataaatataccattcaatacttga 560

                                                                       
Query: 361 tcacagtgccacattggcatccactgaaattgcacatatgtctctgattatgtgcaattc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcacagtgccacattggcatccactgaaattgcacatatgtctctgattatgtgcaattc 620

                                                                       
Query: 421 tcaggtgtgaattaaaatctttacatgtgaaatccctactaaatatatttctttaaagta 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcaggtgtgaattaaaatctttacatgtgaaatccctactaaatatatttctttaaagta 680

                                                                       
Query: 481 tttttccttatttgttttaattatgtcgatgtttggggtatggtatgtgcacataagtgt 540
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 681 tttttccttatttgttttaattatgtcgatgtttggggtatggtatgtgcacgtaagtgt 740

                                                                       
Query: 541 agatatctatgggaagcagaggagtgcagtgaatcccctggagctggggttacaagtgca 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agatatctatgggaagcagaggagtgcagtgaatcccctggagctggggttacaagtgca 800

                              
Query: 601 tcctgggaactgaacccca 619
           ||||| |||||||||||||
Sbjct: 801 tcctgagaactgaacccca 819


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1019
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1009
Effective search space:   614481
Effective search space used:   614481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)