Query= MSMg01no137_e24.b1 MSMg01no137_e24.b1 CHROMAT_FILE:
MSMg01no137_e24.b1 PHD_FILE: MSMg01no137_e24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:53:57 2005
(659 letters)
>mm_chr1_60504903_60505961
Length = 1059
Score = 1133 bits (586), Expect = 0.0
Identities = 631/658 (95%), Gaps = 20/658 (3%)
Strand = Plus / Minus
Query: 1 tgaaggctcacaaccatctgtacagtgtactcatatacataaaataaataaataaatctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 tgaaggctcacaaccatctgtacagtgtactcatatacataaaataaataaataaatctt 605
Query: 61 aagaaagaaagcgagagcgaaagagcgagaaaggaaagagattgaagaaatagtttttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 aagaaagaaagcgagagcgaaagagcgagaaaggaaagagattgaagaaatagtttttta 545
Query: 121 gaaactgctggattctaacgctcctaaatttacatttccagtcctttgttatcaaaatga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 gaaactgctggattctaacgctcctaaatttacatttccagtcctttgttatcaaaatga 485
Query: 181 ttctcaaaccatgtcttccccatttccaagaaaatgcagttataatacaaacatgaacct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ttctcaaaccatgtcttccccatttccaagaaaatgcagttataatacaaacatgaacct 425
Query: 241 caaagtaccaactgaagtactcaccaaagacataaaacaaaataacaaagtagaaaaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 caaagtaccaactgaagtactcaccaaagacataaaacaaaataacaaagtagaaaaaat 365
Query: 301 agcaaggccattaagatcagctggatatgtgcagacttctcaaaaccttacagagtgcta 360
||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 364 agcaaagccattaagatcagctggatatgtgcagacttcccaaaaccttgcagagtgcta 305
Query: 361 gggaagaattctttaaatatttcattaagaagaaaacccatcttaagaagaatctgggtt 420
|||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 304 gggaagaattctttaaatatttca------------------ttaagaagaatctgggtt 263
Query: 421 taacagccagcaaaacaaacagacacagacaaacacacacatatacactcactaaattca 480
||||||||||||||||| |||||||| ||| ||||||||||| ||||||||||| ||||
Sbjct: 262 taacagccagcaaaacagacagacac--acacacacacacatacacactcactaagttca 205
Query: 481 gtaacaaattgaattcaaattcacaaaataaaaccaaacaaataaccactaatgctctac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gtaacaaattgaattcaaattcacaaaataaaaccaaacaaataaccactaatgctctac 145
Query: 541 ctggaaagacgcttggaggagacggagtaggcacagcaatgggtacccccacactaccac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 ctggaaagacgcttggaggagacggagtaggcacagcaatgggtacccccacactaccac 85
Query: 601 ttccgctgttctcccgactgctgctccgactacttgggtgacttcctccactgctccc 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 ttccgctgttctcccgactgctgctccgactacttgggtgacttcctccactgctccc 27
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1059
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1049
Effective search space: 680801
Effective search space used: 680801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no137_e24.g1 MSMg01no137_e24.g1 CHROMAT_FILE:
MSMg01no137_e24.g1 PHD_FILE: MSMg01no137_e24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:53:58 2005
(271 letters)
>mm_chr1_60408633_60409304
Length = 672
Score = 503 bits (260), Expect = e-147
Identities = 269/272 (98%), Gaps = 1/272 (0%)
Strand = Plus / Plus
Query: 1 agagtctactgaattgtaaagttgtttaaggtcctggagatggcttggttgaacttgtag 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 agagtctactgaattgtaaagttgtttaaggtcctggagatggcttggttgagcttgtag 260
Query: 61 agcttttaagatctgtgacagtttaccacatgctcctaagcccttttgttgttgttgttc 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agctcttaagatctgtgacagtttaccacatgctcctaagcccttttgttgttgttgttc 320
Query: 121 ttttccatgtaggcttcccggcaagcttcaggaattccagggcttactccaactgaagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttccatgtaggcttcccggcaagcttcaggaattccagggcttactccaactgaagaa 380
Query: 181 aagtaaggatgtttgtttggttttgttttatgaagtagagacatttcttctttttttggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagtaaggatgtttgtttggttttgttttatgaagtagagacatttcttctttttttggt 440
Query: 241 atcaaaacaaaactataattttg-gggggggg 271
||||||||||||||||||||||| ||||||||
Sbjct: 441 atcaaaacaaaactataattttgtgggggggg 472
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 271
Length of database: 672
Length adjustment: 9
Effective length of query: 262
Effective length of database: 663
Effective search space: 173706
Effective search space used: 173706
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
