XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCCAAATACGCGGAATTCCT
TGATCCACTTACATTTGACCTAAGCACAAGGAGATAGGAATGGATCAATT
CGCACTCTTCTACATGATAACCACCAGTTGTGCCAGCACCATTTGTTGAA
AATGCTGTCTTTTATTGACTGAATGGTTTTTGCTCCCTTGTCAAAGATCA
AGTGACCATAGGTGTGTGGGTTCATTTCTTGGTCTTTAATTCTATTCCAT
TGGTCTACTTGTCTGTCACTATACCAGTACAACGCAGGTTTTATTACAAT
TGCTCTGTAGTACAGCTTTATGTCAGGCATGGTGATTCCACCAGAGTTTC
TTTTATCCTTGAGAAGAGTTTTTGCTATCCTAGGCTTTTTGTTATTCCAG
ATGAATTTCTAATTTGTTGAAGAATTGAGTTGGAATTTTGATGGGGATTG
CATTGAATCTGTAGATTGCTTTTAGCAAGATAGCCATTTTTACAATGTTT
AACCTGTCAATCCATGATCATGGGAGATCTTTCCATCTTCTGAGATCTTC
TTTAATTTCTTTCTTCAGAGACTTGAAGTTCTTATCATACAGATATTTCA
CTTCCTTAGTTAGAGTCACGCCAAGGTATTTTATATTATTTGTGACTATT
GAGAAGGGTGTTGCTTCATTAATTTCCTTCTCAGNCTATATATTCTTTGT
GTATAAAAGGACCATTGACTTGTTACAGTTAATTTTATATCCCN

AGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXTTTCCGAATTCTATTTCATATTATTGTATCTAAAGAAAAAATT
TACAGTTATAGTCAACCACACTCATGTCACAGAACTACTTCTCTCCTCTG
TTTCACTCAATCAGGATCAGATAATTTTTCTGTGTTATTACTATACTTTG
TAAAAGTCTTTGCATAAGCATGTATCTATTAAACCAATTTTCCTGCTTTT
ATAATTCTTATATAGGCAGAGGTGGTGGTACATGTTTGTAATCTCAGAAC
TTAGTACACTGAGCTTTAAGGATCTCAACTTCATGGCTAATATTATTACC
AGAGTTTGGGTAATTAAACCTAGATTCTCAGGTTTAGAAATAAAGTGTTT
TACTGACTAAGGCATCCTTGTAGCCCTAAGTTCAATCTATAGTAAAATAC
CTTAGCATCAATCTGGTTCTGAGAAGCTACAAGCTAGAAAAGTTTGACAA
CCACACTGTTTAGGGAATGTTGTTGGTCAGTTTGTCTGTGAGACTAAATC
ATACTATTCATGTAAGAATGTAATTTCAGTTTAGCACAATAGTATTCTAC
ACTTTTCATTGACCTTGGGCACTTCTTGATAAATATTTGCACTCTTTTAT
TGGTCAGTATTGAGGTTCAAGACACAAGATACACCTAAAAACCAATAATA
CCTGTAGTGTATAGGTAGTTTTTCACTTTCTAATATTCTT

Query= MSMg01no137_l15.g1 MSMg01no137_l15.g1 CHROMAT_FILE:
MSMg01no137_l15.g1 PHD_FILE: MSMg01no137_l15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:31 2005
         (572 letters)



>mm_chr1_100840337_100841308
          Length = 972

 Score = 1058 bits (547), Expect = 0.0
 Identities = 562/567 (99%)
 Strand = Plus / Plus

                                                                       
Query: 6   gaattctatttcatattattgtatctaaagaaaaaatttacagttatagtcaaccacact 65
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattctatttcatattattgtatctaaagaaaaaatttacagttatagtcaaccacact 265

                                                                       
Query: 66  catgtcacagaactacttctctcctctgtttcactcaatcaggatcagataatttttctg 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 catgtcacagaactacttctctcctctgtttcactcaatcaggatcagataatttttctg 325

                                                                       
Query: 126 tgttattactatactttgtaaaagtctttgcataagcatgtatctattaaaccaattttc 185
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tgttattaatatactttgtaaaagtctttgcataagcatgtatctattaaaccaattttc 385

                                                                       
Query: 186 ctgcttttataattcttatataggcagaggtggtggtacatgtttgtaatctcagaactt 245
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ctgattttataattcttatataggcagaggtggtggtacatgtttgtaatctcagaactt 445

                                                                       
Query: 246 agtacactgagctttaaggatctcaacttcatggctaatattattaccagagtttgggta 305
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 446 agtacactgagctttaaggatcacaacttcatggctaatattattaccagagtttgggta 505

                                                                       
Query: 306 attaaacctagattctcaggtttagaaataaagtgttttactgactaaggcatccttgta 365
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 attaaacctagattctcaggtttagaaataaagtgttttactgactaaggcatccttgta 565

                                                                       
Query: 366 gccctaagttcaatctatagtaaaataccttagcatcaatctggttctgagaagctacaa 425
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 gccctaagttcaatctatagtaaaataccttagcatcaatctggttctgagaagctacaa 625

                                                                       
Query: 426 gctagaaaagtttgacaaccacactgtttagggaatgttgttggtcagtttgtctgtgag 485
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 626 gctagaaaagtttgacaaccacactgttgagggaatgttgttggtcagtttgtctgtgag 685

                                                                       
Query: 486 actaaatcatactattcatgtaagaatgtaatttcagtttagcacaatagtattctacac 545
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 686 actaaatcatactattcatgtaagaatgtaatttcagtttagtacaatagtattctacac 745

                                      
Query: 546 ttttcattgaccttgggcacttcttga 572
           |||||||||||||||||||||||||||
Sbjct: 746 ttttcattgaccttgggcacttcttga 772


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 972
Length adjustment: 10
Effective length of query: 562
Effective length of database: 962
Effective search space:   540644
Effective search space used:   540644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)