Query= MSMg01no137_o14.b1 MSMg01no137_o14.b1 CHROMAT_FILE:
MSMg01no137_o14.b1 PHD_FILE: MSMg01no137_o14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:46 2005
(597 letters)
>mm_chr1_150626100_150627110
Length = 1011
Score = 1027 bits (531), Expect = 0.0
Identities = 586/615 (95%), Gaps = 22/615 (3%)
Strand = Plus / Plus
Query: 1 atacttgaacagttgacagaatattaaaatacatctgcaaaagtgtgagggatttatatt 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atacttgaacagtggacagaatattaaaatacatctgcaaaagtgtgagggatttatatt 260
Query: 61 tgtaatttgtattagacgatatttttcacaggtggaattaaaacacatttgcaaattcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtaatttgtattagacgatatttttcacaggtggaattaaaacacatttgcaaattcat 320
Query: 121 aggcaataacatgcttaaaatgcatttgtttcattaagaacat-tacaaaatttataaat 179
||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 321 aggcaataacatgcttaaaatgcatttgtttcattaagaacatct-caaaatttataaat 379
Query: 180 aatttagaagatttttaaatcatttccatcatttcatttgcaacacattagtacattggc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aatttagaagatttttaaatcatttccatcatttcatttgcaacacattagtacattggc 439
Query: 240 atttaaaatgccttatatattgtatcccgtagtggctatatatgcatgtatttactgctt 299
||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 440 atttaaaatgccttaaatattgtatccggtagtggctatatatgcatgtatttactgctt 499
Query: 300 tcacctagtgagtgagatccaaaatatcatatttatgtaaaatttatttctctccatttt 359
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tcacctagtgagtgaaatccaaaatatcatatttatgtaaaatttatttctctccatttt 559
Query: 360 at------cttatctgtttcttcaacactaacatttgaataactgtgcacagttattttt 413
|| |||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 560 atttttatcttatctgtttcttcaacactaacattttaataactgtgcacagttattttt 619
Query: 414 t---gtttttttgggttttttttt--------gtgaggttgtatttataataagtaatta 462
| |||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 620 tttggttttttt---ttttttttttttttttggtgaggttgtatttataataagtaatta 676
Query: 463 agaatcacacagctgggttctttttcatctgtatctggaaacctttttggataactgtgt 522
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 677 agaatcacacagctgggttctttttcatctgtatctggaaacctttctggataactgtgt 736
Query: 523 tcctgactacaaaattcagacaattataggcattacccaaagttgttctgaatattagtg 582
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 tcctgactacaaaattcggacaattataggcattacccaaagttgttctgaatattagtg 796
Query: 583 taaataattaacatt 597
|||||||||||||||
Sbjct: 797 taaataattaacatt 811
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 1011
Length adjustment: 10
Effective length of query: 587
Effective length of database: 1001
Effective search space: 587587
Effective search space used: 587587
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no137_o14.g1 MSMg01no137_o14.g1 CHROMAT_FILE:
MSMg01no137_o14.g1 PHD_FILE: MSMg01no137_o14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:46 2005
(556 letters)
>mm_chr1_150763413_150764368
Length = 956
Score = 692 bits (358), Expect = 0.0
Identities = 376/382 (98%)
Strand = Plus / Minus
Query: 175 cagcatggtaatcagcaaaaatggaagctgagggctcagattctcagctgcaagaatgga 234
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 956 cagcatggtaatcagcaaaaatggaagctgagggctcagattctcagctgcaagcatgga 897
Query: 235 gcaagggaaacaggaaccatgtgaaatttttaaatctcaaaacttgacacctaaaatttc 294
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 896 gcaaggaaaacaggaaccatgtgaaatttttaaatctcaaaacttgacacctaaaatttc 837
Query: 295 ctaaagagcaccaccatttggggaatcaggtgttcaaatgccaaatcctatggaacacat 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 ctaaagagcaccaccatttggggaatcaggtgttcaaatgccaaatcctatggaacacat 777
Query: 355 ttctaaatcaaaccaccacaggagaagtaaaccatatggcatcagtaccggtgtatttaa 414
|||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 776 ttctaaatcaaaccaccacaggagaagtaaaccatatggcatcattaccagtgtatttaa 717
Query: 415 atattgaacacaatgttctgagcatttagttttgtttagacacttcaatttctgttggta 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 atattgaacacaatgttctgagcatttagttttgtttagacacttcaatttctgttggta 657
Query: 475 gcatcatgatggtagcagaatgatgttctttgtattcatggcatcaaagaaccaataata 534
|||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 656 gcatcatgatggtaacagaatgatgttctttgtattcatggcatcaaagaactaataata 597
Query: 535 cctactccaagggaatgaataa 556
||||||||||||||||||||||
Sbjct: 596 cctactccaagggaatgaataa 575
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 956
Length adjustment: 10
Effective length of query: 546
Effective length of database: 946
Effective search space: 516516
Effective search space used: 516516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
