XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAGAATCCGCGGAATT
CCTTGCAATTATCGACCCTGGGAACGCTATTGGATCATCTTGTGTCTGAG
TCCCTGCTACCTTAGTAGGAAATTGATAATACCTATTTCATATGTTTACT
GTATTAGAATTACATAACTGTAAAGCATTTAGAACCCAGGATAAAAAAGG
AAGCTCAAAACTGTGATATGTAAGTGTTCACTTTATATATTTAGAGGAAG
CACTTAAGAGATGACTCAGCAGTTAAGAGCAGTTGCTGCTCTTCCAGAGA
GCCTGACTTCTTTCCACCACCCATAAACAGCTCACAACCACCTAGAACTC
CAGCTCCAGAACATTTGATACCTTCATCTGGATTCTGTGGGCATCTCACA
CCTATACACACAGACAGACAGACAGACAGACACACACATAGATAGATAGA
TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA
GATAGATAGNTGNNNTNNNNNNNNNNNTNNNNNTNTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTCTCTTTTTTTTTTTTTTCCCNTTTTCTCTC
TTCCCCCTCCTTTCCCTTTCTTTCTTTTTCCCCCTCTTTTCTCTACTTTT
CCTCCCTTNCCCCTTTTCCACTCTTCTCTCGTTCTCTCGTACTCCTTCTT
CCTCTTTTGCCGTTCACACGTTCTCTTTTG

ATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTATATCTCACAAATCACTCATAGGCATGA
AGGTGGAAGGGAGAGGGGTGGGCAGAGGTAGCAGAGATTAAAGGAAACCC
CTATTTATCATTTTGCAATCACATGAAACCCTAACTGTAACTCACTGGTA
CAAACACTCAGCATTTTCTCAATTTTAACAACCAAAGGTGTTTAGCAAGT
ACTTGAACTCCAGCACATTAGATCCAGAGCCTGGGTTTTCTGTTCACTCA
CTCACCAGATGAGAGATGACAACCCTGAAAATCCAACCAGCACTTCACAC
AACACTGATGCTTTGTTAATGGGGGAGCTAATTACTATTCCAGTTTCCTG
GCTTAAGTGTCTTAAATTCTTCTACTTGCTTATGCCTCGGGCATCAAGAA
TAACAAAACTAAACACAAGGCTTCCTATGAGCTCCATTAATGAAAATAGC
CCAGCCATGTTTTAGTGAAATTGTTTGTCATCAAATATACATGAAGGACC
TGCTGCCCTACCTGACTAGACATGACAATTTAACTTGGTGTTTTCCATTG
TGGCAACATGATCATAAACATATTAACAAGTCCCACAGTGTGATCAACAA
CAGATGTAGAATTCAAAGTGTTGACAAGTCTCATCAGGTATTTGGGCTTT
ACATGTTTTCCACCACATCT

Query= MSMg01no138_a21.g1 MSMg01no138_a21.g1 CHROMAT_FILE:
MSMg01no138_a21.g1 PHD_FILE: MSMg01no138_a21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:58 2005
         (649 letters)



>mm_chr1_140629601_140630649
          Length = 1049

 Score = 1216 bits (629), Expect = 0.0
 Identities = 644/649 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tatatctcacaaatcactcataggcatgaaggtggaagggagaggggtgggcagaggtag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tatatctcacaaatcactcataggcatgaaggtggaagggagaggggtgggcagaggtag 260

                                                                       
Query: 61  cagagattaaaggaaacccctatttatcattttgcaatcacatgaaaccctaactgtaac 120
           ||||||||||||||||||||||||||||||||| ||||||| || |||||||||||||||
Sbjct: 261 cagagattaaaggaaacccctatttatcattttacaatcacgtggaaccctaactgtaac 320

                                                                       
Query: 121 tcactggtacaaacactcagcattttctcaattttaacaaccaaaggtgtttagcaagta 180
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcgctggtacaaacactcagcattttctcaattttaacaaccaaaggtgtttagcaagta 380

                                                                       
Query: 181 cttgaactccagcacattagatccagagcctgggttttctgttcactcactcaccagatg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttgaactccagcacattagatccagagcctgggttttctgttcactcactcaccagatg 440

                                                                       
Query: 241 agagatgacaaccctgaaaatccaaccagcacttcacacaacactgatgctttgttaatg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agagatgacaaccctgaaaatccaaccagcacttcacacaacactgatgctttgttaatg 500

                                                                       
Query: 301 ggggagctaattactattccagtttcctggcttaagtgtcttaaattcttctacttgctt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggggagctaattactattccagtttcctggcttaagtgtcttaaattcttctacttgctt 560

                                                                       
Query: 361 atgcctcgggcatcaagaataacaaaactaaacacaaggcttcctatgagctccattaat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atgcctcgggcatcaagaataacaaaactaaacacaaggcttcctatgagctccattaat 620

                                                                       
Query: 421 gaaaatagcccagccatgttttagtgaaattgtttgtcatcaaatatacatgaaggacct 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gaaaatagcccagccatgttttagtgaaattgtttgtcatcaaatatacatgaaggacct 680

                                                                       
Query: 481 gctgccctacctgactagacatgacaatttaacttggtgttttccattgtggcaacatga 540
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 681 gctgccctacctgactagacatgacaatttaacttggtgtttcccattgtggcaacatga 740

                                                                       
Query: 541 tcataaacatattaacaagtcccacagtgtgatcaacaacagatgtagaattcaaagtgt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tcataaacatattaacaagtcccacagtgtgatcaacaacagatgtagaattcaaagtgt 800

                                                            
Query: 601 tgacaagtctcatcaggtatttgggctttacatgttttccaccacatct 649
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tgacaagtctcatcaggtatttgggctttacatgttttccaccacatct 849


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1049
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1039
Effective search space:   663921
Effective search space used:   663921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)