Query= MSMg01no138_i07.b1 MSMg01no138_i07.b1 CHROMAT_FILE:
MSMg01no138_i07.b1 PHD_FILE: MSMg01no138_i07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:55:35 2005
(240 letters)
>mm_chr1_45701262_45701902
Length = 641
Score = 429 bits (222), Expect = e-125
Identities = 234/238 (98%), Gaps = 1/238 (0%)
Strand = Plus / Minus
Query: 4 ggaattctctggac-gcacagggaggggtgacccagcgaagttactgtgatcaggaattc 62
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 441 ggaattctctggacagcacagggaggggtgacccagcgaagttactgtgatcaggatttc 382
Query: 63 tgtgcacaaaccaatggtaaggaatgcagtaggaacaacaaatattccttaaggtgttgg 122
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 381 tgtgcacaaaccaatggtaaggaatgcagtaggaacagcaaatattccttaaggtgttgg 322
Query: 123 cttatcctaggggtcaagaaatcttcatgaaggcctgttgcatacaatatttctcaatat 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttatcctaggggtcaagaaatcttcatgaaggcctgttgcatacaatatttctcaatat 262
Query: 183 gaaaaaacctaaggtaaaaagagctctaaactaaaatagaaaaagaaaaaccaaagat 240
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaaaaacataaggtaaaaagagctctaaactaaaatagaaaaagaaaaaccaaagat 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 641
Length adjustment: 9
Effective length of query: 231
Effective length of database: 632
Effective search space: 145992
Effective search space used: 145992
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no138_i07.g1 MSMg01no138_i07.g1 CHROMAT_FILE:
MSMg01no138_i07.g1 PHD_FILE: MSMg01no138_i07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:55:35 2005
(442 letters)
>mm_chr1_45546346_45547187
Length = 842
Score = 775 bits (401), Expect = 0.0
Identities = 435/453 (96%), Gaps = 11/453 (2%)
Strand = Plus / Plus
Query: 1 caggacagccagggctatgtagagagcccctctgaaaaacaacaacaaaaacaaaatcag 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 caggacagccagggctatgtagagagcccctctgaaaaacaacaacaaaaacgaaatcag 260
Query: 61 caaagaaaggaaatggcatctgcataaagcaacaggtaagaggctgcaggcaagtgtgat 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 261 caaagaaaggaaatggcatctgcataaagcaacaggtaagagactgcaggcaagtgtgat 320
Query: 121 tatcatgtcaaactcctgaatgcttttgactcaggagacattaaccacatggtagcaaaa 180
||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 321 tattatgtcagactcctgaatgcttttgactcaggagacattaaccacgtggtagcaaaa 380
Query: 181 ttgaggtttgttttgttttgttttatttagctttgcttt-----------tgtttgtttg 229
||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 381 ttgaggtttgttttgttttgttttatttagctttgctttgtttttttgtttgtttgtttg 440
Query: 230 tttgtttgtttgttttttaactaagaactgggcctgttcttctttctaagtgcaatagtt 289
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 441 tttgtttgtttgttttttaactaagaactgggcctgctcttctttctaagtgcaatagtt 500
Query: 290 ctcaacctgtgggttatgaccacaggggctgaagaactttttcacaggggttgcccaaga 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 501 ctcaacctgtgggttatgaccacaggggctgaagaactttttcacaggggttgcctaaga 560
Query: 350 ccattggaacacagatgtttacattgaaaatcataacagaaacaaaattacagttataaa 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccattggaacacagatgtttacattgaaaatcataacagaaacaaaattacagttataaa 620
Query: 410 gtagcagcaaaaataatgttatggttggggggg 442
|||||||||||||||||||||||||||||||||
Sbjct: 621 gtagcagcaaaaataatgttatggttggggggg 653
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 842
Length adjustment: 9
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
