CTCCTTNTCATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCCTCCCAAGCTAACCTGTCTTCCACTCTGTATCCAGCA
CTCCCAAACCAGGAGAGAGTGACTGAAAGATTGCTCCATGCTCCCTCCCA
CAGAGTGTGCAGCATTACTCTCAATTACACACTCTCTCAATGCTGCTTCA
ATTTAAATGTCCCTCATAATTATTGCATTGGAAACTCAATTTTGGGGTAC
AATATTTCAGAGAAGATTGAAACCTGGGACCTCTGTCATCATGGGTAGAT
TAATTTATGATAGGTTTATTGGGTTTGGTTATACATCATGCGATGTCCCT
TGTCATCGCATATGCATATTGCAGCATATCTACTGGATGCTGGTCATATG
CCAGCACCATGCATTTGGATAGCTCCAGAATGACTAGAAATGAATTCTAA
ATAGCCATTAGGCATTGGATCATGAAAAGGAAGAGTAGATCAGATGGCAG
TGCTTTCTGAACAGTCAGCTGCGGCTATTTCTTAGATGCCTTGGGATACT
GTCATCTAAGCATTCCATGCTTTTATCTTCTTTAAAATGCTTCTTAAAAT
TCTTTAAAAAACTATTAAACATTTTAATGTGTTTATTTTATATGCACAAG
TATATTGCCTGCATGTATATGTATGGGCGTGCCACATGTATGCCTGACAC
CCAAAG

TCCCCNTTCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTCAATTCTGAGCCCC
ATTTTTTAATGGGGTTATTTGATTTTCTGGAGCCCACCCTCTTCAGTTCT
TTATATATATTGGATATAAGTCCCCTATCTGATTTAGGATAGGTAAAGAT
CCTTTCCCAAACTGTTGGTAGCCTTTTTGTTTTATTGACAGTATCTTTTG
CCTTGCAGAAGCTTTGCAGTTTCATGAGGTCCCATTTGTCAATTCTCGAT
CTTACAGCACAAGCCATTGCTGTTCTATTCAGGAAATTTTCCCCTATGCC
CATATCTTCAAGGCTTTTCCCCACTTTCCAAGATACAATTTGCCAAATGC
ATGAAACTCTAGAAGAATGAAGACCAAAGTGTGGACACTGTGCCCCTTCT
TAGAATTGGGAACAAAACACCCATGGAAGGAGTTACAAAGACAAAGTTTG
GAGCTGCGACAAAAGGATGGACCATCTAGAGACTGCCTTATCTAGGGATC
CACCCCATAATCAGCTTCCAAACACTGATACCACTGCATACACTAGCAAG
ATTTTGCTGAAAGGACCCAGATATAGCTCTCTCTTGTGAGACTAGGCAGG
GGTCTAGCAAACACATACGTGGATGCTCACAGTCAGCTATTGAATGGATC
ACAG

Query= MSMg01no138_p17.b1 MSMg01no138_p17.b1 CHROMAT_FILE:
MSMg01no138_p17.b1 PHD_FILE: MSMg01no138_p17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:56:12 2005
         (545 letters)



>mm_chr1_31510576_31511520
          Length = 945

 Score =  963 bits (498), Expect = 0.0
 Identities = 531/542 (97%)
 Strand = Plus / Plus

                                                                       
Query: 4   gaattcctcccaagctaacctgtcttccactctgtatccagcactcccaaaccaggagag 63
           ||||||||||||||| || |||||||||| |||||||||||||||||||| |||||||||
Sbjct: 204 gaattcctcccaagcaaatctgtcttccagtctgtatccagcactcccaagccaggagag 263

                                                                       
Query: 64  agtgactgaaagattgctccatgctccctcccacagagtgtgcagcattactctcaatta 123
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 264 agtgactgaaagattgctccatgctccctcccacagagtgtgcagtattactctcaatta 323

                                                                       
Query: 124 cacactctctcaatgctgcttcaatttaaatgtccctcataattattgcattggaaactc 183
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cacactctctcaatactgcttcaatttaaatgtccctcataattattgcattggaaactc 383

                                                                       
Query: 184 aattttggggtacaatatttcagagaagattgaaacctgggacctctgtcatcatgggta 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aattttggggtacaatatttcagagaagattgaaacctgggacctctgtcatcatgggta 443

                                                                       
Query: 244 gattaatttatgataggtttattgggtttggttatacatcatgcgatgtcccttgtcatc 303
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 444 gattaatttatgataggtttattgggtttggttatacatcatgcaatgtcccttgccatc 503

                                                                       
Query: 304 gcatatgcatattgcagcatatctactggatgctggtcatatgccagcaccatgcatttg 363
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 504 gcatatgcatattgcagcatatctattggatgctggtcatatgccagcaccatgcatttg 563

                                                                       
Query: 364 gatagctccagaatgactagaaatgaattctaaatagccattaggcattggatcatgaaa 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gatagctccagaatgactagaaatgaattctaaatagccattaggcattggatcatgaaa 623

                                                                       
Query: 424 aggaagagtagatcagatggcagtgctttctgaacagtcagctgcggctatttcttagat 483
           | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 atgaagagtagatcagatgacagtgctttctgaacagtcagctgcggctatttcttagat 683

                                                                       
Query: 484 gccttgggatactgtcatctaagcattccatgcttttatcttctttaaaatgcttcttaa 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gccttgggatactgtcatctaagcattccatgcttttatcttctttaaaatgcttcttaa 743

             
Query: 544 aa 545
           ||
Sbjct: 744 aa 745


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 945
Length adjustment: 10
Effective length of query: 535
Effective length of database: 935
Effective search space:   500225
Effective search space used:   500225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)