Query= MSMg01no141_o03.b1 MSMg01no141_o03.b1 CHROMAT_FILE:
MSMg01no141_o03.b1 PHD_FILE: MSMg01no141_o03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:00:49 2005
(415 letters)
>mm_chr1_111983078_111983892
Length = 815
Score = 756 bits (391), Expect = 0.0
Identities = 409/415 (98%)
Strand = Plus / Plus
Query: 1 caccttgttttcctttcctgaaaagtaaagaaaatgagttggaagctaaggaaaagctta 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caccttgtttttctttcctgaaaagtaaagaaaatgagttggaagctaaggaaaagctta 260
Query: 61 cattattttctcacagtgagataggcttgtctcaagtaatttaaaatgattaatttctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cattattttctcacagtgagataggcttgtctcaagtaatttaaaatgattaatttctct 320
Query: 121 ttgtatgtatcatattatctgcttgatttgagtctaatactgttatgtttgaaatatttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgtatgtatcatattatctgcttgatttgagtctaatactgttatgtttgaaatatttc 380
Query: 181 attattttaaactactttattaatattaacactaatatttgtggcacacatcttttcctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attattttaaactactttattaatattaacactaatatttgtggcacacatcttttcctt 440
Query: 241 tctaattttagatattcctcttcccaatccatttatgattttcttttaaatttccatagt 300
|||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 441 tctaattttatatattcctcttcccaatccatttatgatgctcttttaaatttccatagt 500
Query: 301 ttgttttattgtctgtatttactctcatgcaatctataaaaactgggtctcttcccagca 360
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgtcttattgtctgtatttactctcatgcaatctataaaaactgggtctcttcccagca 560
Query: 361 gtgtttgttgaatggtctacactatgtcatgtgacttcctatattgctgtgtaaa 415
||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 561 gtgtttgttgaatggtctacattatgtcatgtgacttcctatattgctgtgtaaa 615
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 415
Length of database: 815
Length adjustment: 9
Effective length of query: 406
Effective length of database: 806
Effective search space: 327236
Effective search space used: 327236
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no141_o03.g1 MSMg01no141_o03.g1 CHROMAT_FILE:
MSMg01no141_o03.g1 PHD_FILE: MSMg01no141_o03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:00:49 2005
(734 letters)
>mm_chr1_112122029_112123162
Length = 1134
Score = 1286 bits (665), Expect = 0.0
Identities = 674/677 (99%), Gaps = 1/677 (0%)
Strand = Plus / Minus
Query: 58 atacacgtttacatgaaacactgaatttcttaacatgcctacagaagtccaatattgaaa 117
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1134 ataca-gtttacatgaaacactgaatttcttaacatgcctacagaagtccaatattgaaa 1076
Query: 118 caagttaaagatttatttcctcttggaattctctattgttattaaaaacatatatggaga 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1075 caagttaaagatttatttcctcttggaattctctattgttattaaaaacatatatggaga 1016
Query: 178 gaaaaagtttgagtactaatttataggtctagtaattcttttcatgtatatatgtatata 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1015 gaaaaagtttgagtactaatttataggtctagtaattcttttcatgtatatatgtatata 956
Query: 238 tatatacaggaatatatatgttcctgatcagtatctagtccagaatttgtgaatttttaa 297
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 955 tatatacaggaatatatatattcctgatcagtatctagtccagaatttgtgaatttttaa 896
Query: 298 actacagacttgtaaaataccaaagtcaatggtgtggaaagggttgtaatcaccccaaaa 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895 actacagacttgtaaaataccaaagtcaatggtgtggaaagggttgtaatcaccccaaaa 836
Query: 358 cattatttttacacaagattttgcaatgcagtataaagtagtatttttcataaatgaaga 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 cattatttttacacaagattttgcaatgcagtataaagtagtatttttcataaatgaaga 776
Query: 418 acactgtgcatataaataaaaattaaagtcatattaagggaattatgccattctgtgtta 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 acactgtgcatataaataaaaattaaagtcatattaagggaattatgccattctgtgtta 716
Query: 478 atttaccaacataccatatcgtcgtttacaagtatataaaagaattaagtatactaaata 537
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 715 atttaccaacataccatatcgtcatttacaagtatataaaagaattaagtatactaaata 656
Query: 538 ttatgtgaagataggctttgaataaatgaaactaataaaattattcataaactaagcact 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 ttatgtgaagataggctttgaataaatgaaactaataaaattattcataaactaagcact 596
Query: 598 aagttaaattgtaagccaatgtatgtaagttgcattttaaaacaaattcaatgacttaac 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 aagttaaattgtaagccaatgtatgtaagttgcattttaaaacaaattcaatgacttaac 536
Query: 658 tgaagatataaatctctcaaaggtgagaagaaaataaacaaaaacataaaataattaacc 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 tgaagatataaatctctcaaaggtgagaagaaaataaacaaaaacataaaataattaacc 476
Query: 718 atcacattacatagatt 734
|||||||||||||||||
Sbjct: 475 atcacattacatagatt 459
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 734
Length of database: 1134
Length adjustment: 10
Effective length of query: 724
Effective length of database: 1124
Effective search space: 813776
Effective search space used: 813776
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
|
