Query= MSMg01no141_o24.b1 MSMg01no141_o24.b1 CHROMAT_FILE:
MSMg01no141_o24.b1 PHD_FILE: MSMg01no141_o24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:00:56 2005
(649 letters)
>mm_chr1_52536890_52537938
Length = 1049
Score = 973 bits (503), Expect = 0.0
Identities = 524/531 (98%)
Strand = Plus / Minus
Query: 1 tttctcagggcttcaaaataattaaactatatgtaatctgtccacagcagcccactggaa 60
||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 531 tttctcagggcttcaaagtaattaaactatatgcaatttgtccacagcagcccactggaa 472
Query: 61 cttctgatcttaacagcaatttctgttttttgtttaattctcctatacttcctccattga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 cttctgatcttaacagcaatttctgttttttgtttaattctcctatacttcctccattga 412
Query: 121 aagttacagtctccaggactgtagagttcttgccatggtgtaggcattctatgacataga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 aagttacagtctccaggactgtagagttcttgccatggtgtaggcattctatgacataga 352
Query: 181 cctgggcataatgacttggtctcacagcccttcagacacaatgatacacctattaacagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 cctgggcataatgacttggtctcacagcccttcagacacaatgatacacctattaacagc 292
Query: 241 cagacttggcgatggctgggagaaaaatgcctcctttgttagttatggattcttgtgtgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 291 cagacttggcgatggctgggagaaaaatgcctcctttgttagttatggattcttgagtgc 232
Query: 301 attcttcagttattagaaataataccacaataactggactgctggtctagtcgtgaagtg 360
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 attcttcagttattggaaataataccacaataactggactgctggtctagtcgtgaagtg 172
Query: 361 tttgagtggatcgagctgctgctgccgatttctatgagctgaactgctgacttcctaaca 420
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 171 tttgagtggatcgagctgctgctgccgatttctatgagctgaactgctgccttcctaaca 112
Query: 421 acacagactggagttgctccaaagaacagtttttaaacagtccacttcccccgtatccta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 acacagactggagttgctccaaagaacagtttttaaacagtccacttcccccgtatccta 52
Query: 481 ataacgtttgttttccactacttatggtgggctagaagggaggttagagca 531
|||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 51 ataacgtttgttttccactacttatggtgggctagaagggaggttaaagca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1049
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1039
Effective search space: 663921
Effective search space used: 663921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no141_o24.g1 MSMg01no141_o24.g1 CHROMAT_FILE:
MSMg01no141_o24.g1 PHD_FILE: MSMg01no141_o24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:00:56 2005
(647 letters)
>mm_chr1_52379742_52380793
Length = 1052
Score = 1147 bits (593), Expect = 0.0
Identities = 631/647 (97%), Gaps = 9/647 (1%)
Strand = Plus / Plus
Query: 1 tattgtgattttcacactggatcttttattagttattcttaactcagtggtgtgaactgt 60
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tattgtgattttgagactggatcttttattagttattcttaactcagtggtgtgaactgt 260
Query: 61 ataatcttttaattgtaacc----aatagagcgctatacttttcgaatgaaacatattac 116
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 261 ataatcttttaattgtaacccaccaatagagcgctatacttttcgaatgaaacatattat 320
Query: 117 aaacaattgaaatatataattaattagcaattaagaagaaaggcttctagacaacacaac 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaacaattgaaatatataattaattagcaattaagaagaaaggcttctagacaacacaac 380
Query: 177 tctgtcgtatagaggaaggcagatacattctgagttactaattaagtcttctgataaagt 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctgtcgtatagaggaaggcagatacattctgagttactaattaagtcttctgataaagt 440
Query: 237 tctatcttagggatacaagagaatcagaacccaggcaagaatacagacatcttcttgaca 296
|||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctatcttagggatacaaaagaaccagaacccaggcaagaatacagacatcttcttgaca 500
Query: 297 ctgggaaaaatttggcttgaaatactcctaattctgtggatacagtctttaaag-tggtt 355
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 501 ctgggaaaaatttggcttgaaatactcctaattctgtggatacagtctttaaagatggtt 560
Query: 356 ttctgttttgtttgtgtatgtgtgtgtgtttttaattttaaagtttaatttatgcatatg 415
||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||
Sbjct: 561 ttctgttttgtttgtgt--gtgtgtgtgtttt--attttaaaatttaatttatgcatatg 616
Query: 416 ggcgttttgcctgtgtgtatttctgtgcagtgcccacagagaccagaaaggggaattagg 475
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ggcgttttgtctgtgtgtatttctgtgcagtgcccacagagaccagaaaggggaattagg 676
Query: 476 tcccatggagctaggtcaccatgagggtcctaagaattgaacctgggtcctctggaagag 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 tcccatggagctaggtcaccatgagggtcctaagaattgaacctgggtcctctggaagag 736
Query: 536 caaccagtactgttaactgttgaaccacatctctgttctttcttttccttccttccttcc 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 caaccagtactgttaactgttgaaccacatctctgttctttcttttccttccttccttcc 796
Query: 596 ttccttccttccttccttccttccttccttccttccttccttccttc 642
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 ttccttccttccttccttccttccttccttccttccttccttccttc 843
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 56
Number of extensions: 20
Number of successful extensions: 20
Number of sequences better than 10.0: 1
Number of HSP's gapped: 17
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1052
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1042
Effective search space: 663754
Effective search space used: 663754
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
