Query= MSMg01no141_p14.b1 MSMg01no141_p14.b1 CHROMAT_FILE:
MSMg01no141_p14.b1 PHD_FILE: MSMg01no141_p14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:01:01 2005
(532 letters)
>mm_chr1_15933643_15934575
Length = 933
Score = 963 bits (498), Expect = 0.0
Identities = 525/534 (98%), Gaps = 3/534 (0%)
Strand = Plus / Plus
Query: 1 cctcctgagtcttcccttggtggctactctc-cctcagtagtgcgaagcaaccacagaca 59
||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||
Sbjct: 201 cctcctgagtcttcccttggtggctactctctcc-cagtagtgcgaagcaaacacagaca 259
Query: 60 gctacccacaccaaaggagggccatgcctgccagaggacacggatccagatggttctaca 119
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 260 gctacccacaccaaaggagggccatgcctgccagaggacacgaatccagatggttctaca 319
Query: 120 gtatgtgggtggacgcattccaggctattgtacttcagaagatgaacatttccagaaagg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gtatgtgggtggacgcattccaggctattgtacttcagaagatgaacatttccagaaagg 379
Query: 180 gggt-ggggggtagggaggctcagggtatttcattgtgtactaagttgctgatctcagag 238
|||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 380 gggtgggggggtagggaggctcagggtatttcactgtgtactaagttgctgatctcagag 439
Query: 239 aatgtggagacttcttttgataaaatcctttaccaacatatgcagtataaacgggaaatt 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aatgtggagacttcttttgataaaatcctttaccaacatatgcagtataaacgggaaatt 499
Query: 299 cagcttcttttcaaagagtcccagattagtctatccatttgcctcaagatgtatatagtt 358
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 500 cagcttcttttcaaagagtcccagaagagtctatccatttgcctcaagatgtatatagtt 559
Query: 359 taacttcgttgctttttctactgggctggttcatggtgtatgtgtgcatgtgtgggcatg 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 taacttcgttgctttttctactgggctggttcatggtgtatgtgtgcatgtgtgggcatg 619
Query: 419 tgcgcatacgtacgtgtgtttgtgtggagagcaaacccttcatgagaggcaagtgctgcc 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tgcgcatacgtacgtgtgtttgtgtggagagcaaacccttcatgagaggcaagtgctgcc 679
Query: 479 actgagttttagctctacccccaacctcttgttctttctttttattttgagaca 532
||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 actgacttttagctctacccccaacctcttgttctttctttttattttgagaca 733
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 532
Length of database: 933
Length adjustment: 10
Effective length of query: 522
Effective length of database: 923
Effective search space: 481806
Effective search space used: 481806
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no141_p14.g1 MSMg01no141_p14.g1 CHROMAT_FILE:
MSMg01no141_p14.g1 PHD_FILE: MSMg01no141_p14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:01:01 2005
(657 letters)
>mm_chr1_16089727_16090783
Length = 1057
Score = 1152 bits (596), Expect = 0.0
Identities = 626/636 (98%)
Strand = Plus / Minus
Query: 1 gtgagatgttgtctaaagacaagaagccgtacacacgtccatctgcgcttgtaagtgaag 60
|||||||| ||||||||||||||||| |||||||||| |||||| ||||||||||||||
Sbjct: 637 gtgagatgctgtctaaagacaagaaggtgtacacacgttcatctgtgcttgtaagtgaag 578
Query: 61 gttgactgagcaacatggtagttgaagactgaacttgggtcctctgcaagagcagtaagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 gttgactgagcaacatggtagttgaagactgaacttgggtcctctgcaagagcagtaagc 518
Query: 121 tcttgatctctaaagcatccgtcaaagagtgcctgtctgtgtgtgtctacttccttgaag 180
||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 517 tcttgatctctaaagcatctgtcaaagagtgcctgtctttgtgtgtctacttccttgaag 458
Query: 181 tataggcatatcccagctgctggagccttccaggttttgggggaatagtgatggttcagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 tataggcatatcccagctgctggagccttccaggttttgggggaatagtgatggttcagt 398
Query: 241 actgcctcaaagaaattaaaatcaaacaacttggtggcctttatcagtgttagggggtgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 actgcctcaaagaaattaaaatcaaacaacttggtggcctttatcagtgttagggggtgt 338
Query: 301 gtttttgacaaggtcttattatataaccctttcctggaatacttgtagtccagacttgct 360
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 337 gtttttgacaaggtcttagtagataaccctttcctggaatacttgtagtccagacttgct 278
Query: 361 ttgaagctttctaagtgctatcttaggtgtgtgccaccatttgcagccaagttgttttta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 ttgaagctttctaagtgctatcttaggtgtgtgccaccatttgcagccaagttgttttta 218
Query: 421 tttcacaaaaccacctaccatcatagtggtgtacttttgagtccatggactcatcaccta 480
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 217 tttcacaaaaccacctaccatcatagcggtgtacttttgagtccatggactcatcaccta 158
Query: 481 cttgaagtcttggagcaagataagcatgggtaggaaagagtacatgggaggaagaaaaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 cttgaagtcttggagcaagataagcatgggtaggaaagagtacatgggaggaagaaaaga 98
Query: 541 cgagaatggctacattctctgcagaaaattggcattgctacagatactctcttgtagctt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 cgagaatggctacattctctgcagaaaattggcattgctacagatactctcttgtagctt 38
Query: 601 gaacacaaaattggctagtcttaacactcaaaaata 636
||||||||||||||||||||||||||||||||||||
Sbjct: 37 gaacacaaaattggctagtcttaacactcaaaaata 2
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space: 677409
Effective search space used: 677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
