Query= MSMg01no143_a06.b1 MSMg01no143_a06.b1 CHROMAT_FILE:
MSMg01no143_a06.b1 PHD_FILE: MSMg01no143_a06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:03:26 2005
(367 letters)
>mm_chr1_103996295_103997061
Length = 767
Score = 414 bits (214), Expect = e-120
Identities = 217/218 (99%)
Strand = Plus / Plus
Query: 150 gcttgttactattagggtgaaacgaacatcaagagacagcctgctaaacacaagtaaaag 209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 gcttgttactattagggtgaaacgaacatcaagagacagcctgctaaacacaagtaaaag 409
Query: 210 gaacttggggtatgaaggatatctcaaataaagacttctgtgcagccctcacagttattt 269
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 410 gaacttggggtatgaaggatatctcaaataaagacttctgagcagccctcacagttattt 469
Query: 270 tctcaggtatctgaggttctcccacatttattcatgcccacaactttaaacaagttttct 329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 tctcaggtatctgaggttctcccacatttattcatgcccacaactttaaacaagttttct 529
Query: 330 aatctgtagtaagttcacagctgactctctgagaatta 367
||||||||||||||||||||||||||||||||||||||
Sbjct: 530 aatctgtagtaagttcacagctgactctctgagaatta 567
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 367
Length of database: 767
Length adjustment: 9
Effective length of query: 358
Effective length of database: 758
Effective search space: 271364
Effective search space used: 271364
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no143_a06.g1 MSMg01no143_a06.g1 CHROMAT_FILE:
MSMg01no143_a06.g1 PHD_FILE: MSMg01no143_a06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:03:26 2005
(320 letters)
>mm_chr1_104184443_104185163
Length = 721
Score = 605 bits (313), Expect = e-178
Identities = 319/321 (99%), Gaps = 1/321 (0%)
Strand = Plus / Minus
Query: 1 tttgtcctttttctc-atgtagtcacattgacttcctcccttttaatttatcttctgtaa 59
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 tttgtcctttttctcaatgtagtcacattgacttcctcccttttaatttatcttctgtaa 462
Query: 60 ttggcttattgaagacaggttgtagggcttgacttggagcactaattgttacatgaattt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 ttggcttattgaagacaggttgtagggcttgacttggagcactaattgttacatgaattt 402
Query: 120 aaatcacaatatctgttctaacctgataaaaacttttaccccatatcttggacttttagt 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 gaatcacaatatctgttctaacctgataaaaacttttaccccatatcttggacttttagt 342
Query: 180 ttctcatgtgaggcaggctgtttcttactccatctaaacatattctgcaaatattccaag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 ttctcatgtgaggcaggctgtttcttactccatctaaacatattctgcaaatattccaag 282
Query: 240 gtccccaggaggaagatgcatcttaatctctgtactttgaaaattggtcaggataatttc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 gtccccaggaggaagatgcatcttaatctctgtactttgaaaattggtcaggataatttc 222
Query: 300 aagtttgaggccagattagtc 320
|||||||||||||||||||||
Sbjct: 221 aagtttgaggccagattagtc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 721
Length adjustment: 9
Effective length of query: 311
Effective length of database: 712
Effective search space: 221432
Effective search space used: 221432
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
