TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTGTTCTACTAATCCTTTCATAAATAATACTTTAACCCACCTATTT
CTTAGCCCATTGTGTATTCCTGTGTTTGGGTGTGACTCGGCTATTGTCCT
AAGTAATTACTATGTAGACTAGCCCTGAGATTTCTAGCTCTATTCAAGTA
AATTGTAATGCCTAATTATTTTCACTGTCTCTACTAGAAGTAAATTTGAG
TGTTACAGAATAGGTAACATTCTTACTGAATTCCAAGCTCAGGGTCGGCT
TCAAGGACTTTCTAGGAACCATTGAAACACTGGTGGAGGCTTAGCTATAT
GTCAAAATCAATCCTTAAAGGCACTTATAATAAAACAGTACTGAAAGAGA
GCATGCAGATCCATACACCCCACTAATGCAGATCTTCTCAAGTGCTGGTG
GTTGCTATAGGATTAAGCTTGTTTGCATGATAATGTACATATTTTATTTC
ATGTTCCTCCTTTGGGGAATGTTCTCCCTGGCAACATCAATGACTCCATG
AATATCAGAAACAGTATGACTCTGGGAAGCAAGAATGTGTCTGGTGATCC
ATAGCAAAATGGTGATGCTGTGAACTTCAGGACAGCCCTTACAGTTATGG
CAAAGAACTCTGAAAACATGAGCTCAAGAATACCTAAATAAGTGTTAGAG
CTGTTATTTACAGGACTCCTCAACTCTGCATAATATGATGATGTTATAC

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTTAACAATAATTTATTCCTTGTCAT
CTTGACACACAGACATCACTCTTAATAACATCTTTTTCTTGTTCATACCC
AAGATCATACAGGAATATGAGCATTACAATATAAACATTCTAAAATTTTA
AAAATATTAAAATTAATTTCTAAAATTTTAGTCCCATAGTCTAAAAATTT
AAACAGTTAAAAAAATCAGTCTCCTTAAATATTCAGTCTGTTTTGTTCTA
GCCCATTGTTTATATTCTGGGGTTAGACTTAAGGATCATTCATTTCTGCC
ATATTTCTATTTTCTGACACATTATTTAAGAGGCAGATAACTTCCAAAAA
TTAACTTAGATTTCTTGCTCACCTCATATCTTAGTTTCTATCTGTGTTAC
TAATGTCACATATGTAGAATAAAATTTTTAAAAAGTACCTAAAGCCCATA
TGGCCATAATAAAATTTCACCCCTAAAAGTAAGACATGTGTTTGAGAAGT
TACAAGAATGAAGGAGACTAACACTATTGGGGCAGTAATCATGTTCACAC
ACTTTTACATAGCTATAGTTTTTCATTTTTATTAACTATACTGGCTGTCA
CCGTGAACATCTACCTACTCCTTATAAAGCTGCTTTTTTCTTTACTCTGT
GTGACAAGAGATTTATCACAGCTGCTTGTAGAGCCTTATATACAATCTTC
AGC

Query= MSMg01no144_c22.g1 MSMg01no144_c22.g1 CHROMAT_FILE:
MSMg01no144_c22.g1 PHD_FILE: MSMg01no144_c22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:56 2005
         (607 letters)



>mm_chr1_7970554_7971560
          Length = 1007

 Score = 1129 bits (584), Expect = 0.0
 Identities = 599/604 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttaacaataatttattccttgtcatcttgacacacagacatcactcttaataacatcttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttaacaataatttattccttgtcatcttgacacacagacatcactcttaataacatcttt 260

                                                                       
Query: 61  ttcttgttcatacccaagatcatacaggaatatgagcattacaatataaacattctaaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcttgttcatacccaagatcatacaggaatatgagcattacaatataaacattctaaaa 320

                                                                       
Query: 121 ttttaaaaatattaaaattaatttctaaaattttagtcccatagtctaaaaatttaaaca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttaaaaatattaaaattaatttctaaaattttagtcccatagtctaaaaatttaaaca 380

                                                                       
Query: 181 gttaaaaaaatcagtctccttaaatattcagtctgttttgttctagcccattgtttatat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gttaaaaaaatcagtctccttaaatattcagtctgttttgttctagcccattgtttatat 440

                                                                       
Query: 241 tctggggttagacttaaggatcattcatttctgccatatttctattttctgacacattat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctggggttagacttaaggatcattcatttctgccatatttctattttctgacacattat 500

                                                                       
Query: 301 ttaagaggcagataacttccaaaaattaacttagatttcttgctcacctcatatcttagt 360
           |||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||
Sbjct: 501 ttaagaggcagataacttccaaaaattaacttagatttcttgcttaaatcatatcttagt 560

                                                                       
Query: 361 ttctatctgtgttactaatgtcacatatgtagaataaaatttttaaaaagtacctaaagc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttctatctgtgttactaatgtcacatatgtagaataaaatttttaaaaagtacctaaagc 620

                                                                       
Query: 421 ccatatggccataataaaatttcacccctaaaagtaagacatgtgtttgagaagttacaa 480
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 621 ccatatggccataataaaatttcacccctaaaagtaagacatatgtttgagaagttacaa 680

                                                                       
Query: 481 gaatgaaggagactaacactattggggcagtaatcatgttcacacacttttacatagcta 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 681 gaatgaaggagactaacactattggggcagtaatcatgttcacacacttttacatagtta 740

                                                                       
Query: 541 tagtttttcatttttattaactatactggctgtcaccgtgaacatctacctactccttat 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tagtttttcatttttattaactatactggctgtcaccgtgaacatctacctactccttat 800

               
Query: 601 aaag 604
           ||||
Sbjct: 801 aaag 804


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1007
Length adjustment: 10
Effective length of query: 597
Effective length of database: 997
Effective search space:   595209
Effective search space used:   595209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)