Query= MSMg01no145_h16.b1 MSMg01no145_h16.b1 CHROMAT_FILE:
MSMg01no145_h16.b1 PHD_FILE: MSMg01no145_h16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:06:34 2005
(502 letters)
>mm_chr1_160472266_160473167
Length = 902
Score = 870 bits (450), Expect = 0.0
Identities = 489/502 (97%)
Strand = Plus / Minus
Query: 1 gaccaagaataaaccaagtaatgaaggacaaacatttaaagtatatgtgactttgcacat 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 gaccaagaataaaccaggtaatgaaggacaaacatttaaagtatatgtgactttgcacat 643
Query: 61 ggacaatgtgaaaaggatagatgatttgaaaggaacatgtggaccaaccctacatttgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 ggacaatgtgaaaaggatagatgatttgaaaggaacatgtggaccaaccctacatttgca 583
Query: 121 tgactgcagcattgagagtgattccaacgaaaaaggacttggagatagaaattgtagtaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 tgactgcagcattgagagtgattccaacgaaaaaggacttggagatagaaattgtagtaa 523
Query: 181 gttggaggtcattcaatagttgtgaatagattgttgatagagacagtgaaggcctttttt 240
||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||
Sbjct: 522 gttggaggtcattcaatagttgttaatagattgttgatagagacagtgaagacctttttt 463
Query: 241 atgatatatgttctggatatactccagtcaagaaaagacaaaatatatggatgtctcact 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 atgatatatgtactggatatactccagtcaagaaaagacaaaatatatggatgtctcact 403
Query: 301 ccattacagcatactctttcaaggtcatagtaggcttgcaagaccaccatgataccttgc 360
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 402 ccattacagcatactctttcaaggtcatagtaggcttgcaagaccagcatgataccttgc 343
Query: 361 cttaagacatgaccaccttccaacagttcctaccttttaaagttttcaccaattcaacac 420
|||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 342 cttaagacgtgaccaccttccaacagttcctaccttttaaagttttcaccagttcagcac 283
Query: 421 tacaacaatgggttgaaattccaagcacatgaaccgctgtagactcaagcacttgcaagc 480
| ||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||
Sbjct: 282 tgcaacaatgggttgaaattccaagcacatgaacctctgtggactcaaacacttgcaagc 223
Query: 481 agaacaaggtctctgcaggggt 502
||||||||||||||| ||||||
Sbjct: 222 agaacaaggtctctgtaggggt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 902
Length adjustment: 10
Effective length of query: 492
Effective length of database: 892
Effective search space: 438864
Effective search space used: 438864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no145_h16.g1 MSMg01no145_h16.g1 CHROMAT_FILE:
MSMg01no145_h16.g1 PHD_FILE: MSMg01no145_h16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:06:34 2005
(249 letters)
>mm_chr1_160345301_160345948
Length = 648
Score = 458 bits (237), Expect = e-133
Identities = 246/249 (98%), Gaps = 1/249 (0%)
Strand = Plus / Plus
Query: 1 cttgaagatccatgaaacgcgcatttggatgtgacgtgagggtgtccccagagataacta 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 201 cttgaagatccatgaaacgcgcatttggatgtgatgtgagggtgtccccagagataacta 260
Query: 61 ggttatgagaactctgatcctttatgtattcataacatgatggctttattggaatatggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggttatgagaactctgatcctttatgtattcataacatgatggctttattggaatatggt 320
Query: 121 aaatgtagacaatgggacctagctggaggaagtagctcttagaggcatgccctttgtggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaatgtagacaatgggacctagctggaggaagtagctcttagaggcatgccctttgtggc 380
Query: 181 catatcatgccccgatttcttcccggatcatctgggtttttttttgttgttgttgttgtt 240
||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 381 catatcatgccccgatttcttcccggatcatctgggtttttgtt-gttgttgttgttgtt 439
Query: 241 tgtttgttt 249
|||||||||
Sbjct: 440 tgtttgttt 448
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 648
Length adjustment: 9
Effective length of query: 240
Effective length of database: 639
Effective search space: 153360
Effective search space used: 153360
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
