AATCATXXXXXXXXXXXXXXXXXXXXXXXCTATCCAAAGAGGACCGCGGA
ATTCAACCTGCCTCTTCTCTGCCCTCAGCTGGACAGGATGGACTACTGCT
GTGGCTTCATAGGATCCTGTTATATTGCCATCTGACGAGTTAAGATGGCA
TCCTTTTCCCTGTGTCCTGTGTATTAGGACTATTCGAAGCCATAGCGCCA
TAAACCACATGCGCTGGCAATGAGAAAGTCCACTCCAGAATTTTAGTCCC
TTACCAGTTCTTTGGAAAATACTGTTTTGTGTCAGGTATTAGAGTATTAA
GTCATTGCTGCCTAAATATGATACACGTCTAAACATTAGCTTAATATTTA
TACAGAGACATGGCAGTTTAAGACAAAGAGAAATGGATGTTTTCTAGTCA
TGGTGTGGGGCACCTTGAACCAAGAATATAGCTCAGTGGGAAAGGTGCTT
GTTGAATAAGCCTGAGGGCAGAGTTCACATCTCCACCACTTTCAAAGAAG
GCAGCCAGACATGGTGGCCTGTCTGTAATCTCAGAGCTTGAAAATCCAAG
ACAAGGGGTCACCTGCTCAAACTGACTATGGAGAGTAGCCAAATGACTGC
GCTCTTAGTTCAGAAAACAAACAAACAACAATAACACCAAAATTTACATC
AGTAAATAAAATAGAGATCAACTGAAGAGGATACCTGCATTAAAC

NNAACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTCAGTTGGAACAGGGGAACTTT
TAAAAAGGGAACTGAATGTTGTTATGAAAATAATTAAGGATTAATAAAAT
TAATGCTTGATTTCCAGGTGCAAACCAAAGCATGACAGACCGTTTGTTTC
ATGTAATGTAAAACAAAACCAAACAGAAGGAACAATCCAATATCCCAGCA
GCAGTTAAAGCCACCTCACTCGGTTCACACTGAGGAACAAAACTTTGCAA
TTCCCTCTCTTCTTAAACACAAGCGGCTCATGCACATAAGCACACTCTGC
ACAATATGCCTCTCTCCTTTCTCGGGGTGCTCACCCTCATTTGTGACGGC
TCCTTTCATTTGCCTGCTGGATTTCAAAGCAGCAAATGAGGTCTGATGGA
ACTGTTCCAGAATCTACAGACCCTTGCCATTTATCTCATCAGCTCACAGC
GGACAATGAAGGGTTAGTGCGGCCATCTCACAAGCCACCCTGCCAGCACG
TTGGAAGCCATGAAAACATACCACTGGAGCCTAGAAACTCCCAGAGGACA
CGGACCAGCACCTAGAGGGGACAGGTGTTCTGCACAGAGGCCCAGAGAAT
AAGGGAAGGTGCTGTCAGAAGACATTTTTCACCACGATCCTTCCAACTAA
AGACGAAGGGAGGG

Query= MSMg01no147_d15.b1 MSMg01no147_d15.b1 CHROMAT_FILE:
MSMg01no147_d15.b1 PHD_FILE: MSMg01no147_d15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:09:46 2005
         (651 letters)



>mm_chr1_99779729_99780779
          Length = 1051

 Score = 1065 bits (551), Expect = 0.0
 Identities = 575/583 (98%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcaacctgcctcttctctgccctcagctggacaggatggactactgctgtggcttc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 gaattcaacctgcctcttctctgccctcagctggacaggatggactactgctgtggcttc 524

                                                                       
Query: 65  ataggatcctgttatattgccatctgacgagttaagatggcatccttttccctgtgtcct 124
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 523 ataggctcctgttatattgccatctgacgagttaagatggcatccttttccctgtgttct 464

                                                                       
Query: 125 gtgtattaggactattcgaagccatagcgccataaaccacatgcgctggcaatgagaaag 184
           |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||
Sbjct: 463 gtgtattaggactattcgaagctatagcgccataaaccacatgcgctggcagtgagaaag 404

                                                                       
Query: 185 tccactccagaattttagtcccttaccagttctttggaaaatactgttttgtgtcaggta 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 tccactccagaattttagtcccttaccagttctttggaaaatactgttttgtgtcaggta 344

                                                                       
Query: 245 ttagagtattaagtcattgctgcctaaatatgatacacgtctaaacattagcttaatatt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 ttagagtattaagtcattgctgcctaaatatgatacacgtctaaacattagcttaatatt 284

                                                                       
Query: 305 tatacagagacatggcagtttaagacaaagagaaatggatgttttctagtcatggtgtgg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 tatacagagacatggcagtttaagacaaagagaaatggatgttttctagtcatggtgtgg 224

                                                                       
Query: 365 ggcaccttgaaccaagaatatagctcagtgggaaaggtgcttgttgaataagcctgaggg 424
           || |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 gggagtttgaaccaagaatatagctcagtgggaaaggtgcttgttgaataagcctgaggg 164

                                                                       
Query: 425 cagagttcacatctccaccactttcaaagaaggcagccagacatggtggcctgtctgtaa 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 cagagttcacatctccaccactttcaaagaaggcagccagacatggtggcctgtctgtaa 104

                                                                       
Query: 485 tctcagagcttgaaaatccaagacaaggggtcacctgctcaaactgactatggagagtag 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 tctcagagcttgaaaatccaagacaaggggtcacctgctcaaactgactatggagagtag 44

                                                      
Query: 545 ccaaatgactgcgctcttagttcagaaaacaaacaaacaacaa 587
           ||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 43  ccaaatggctgcgctcttagttcagaaaacaaacaaacaacaa 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1051
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1041
Effective search space:   667281
Effective search space used:   667281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no147_d15.g1 MSMg01no147_d15.g1 CHROMAT_FILE:
MSMg01no147_d15.g1 PHD_FILE: MSMg01no147_d15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:09:46 2005
         (636 letters)



>mm_chr1_99610595_99611630
          Length = 1036

 Score = 1207 bits (624), Expect = 0.0
 Identities = 633/636 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcagttggaacaggggaacttttaaaaagggaactgaatgttgttatgaaaataattaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcagttggaacaggggaacttttaaaaagggaactgaatgttgttatgaaaataattaag 260

                                                                       
Query: 61  gattaataaaattaatgcttgatttccaggtgcaaaccaaagcatgacagaccgtttgtt 120
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gattaataaaattaatgctggatttccaggtgcaaaccaaagcatgacagaccgtttgtt 320

                                                                       
Query: 121 tcatgtaatgtaaaacaaaaccaaacagaaggaacaatccaatatcccagcagcagttaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcatgtaatgtaaaacaaaaccaaacagaaggaacaatccaatatcccagcagcagttaa 380

                                                                       
Query: 181 agccacctcactcggttcacactgaggaacaaaactttgcaattccctctcttcttaaac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agccacctcactcggttcacactgaggaacaaaactttgcaattccctctcttcttaaac 440

                                                                       
Query: 241 acaagcggctcatgcacataagcacactctgcacaatatgcctctctcctttctcggggt 300
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acaagcggctcgtgcacataagcacactctgcacaatatgcctctctcctttctcggggt 500

                                                                       
Query: 301 gctcaccctcatttgtgacggctcctttcatttgcctgctggatttcaaagcagcaaatg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gctcaccctcatttgtgacggctcctttcatttgcctgctggatttcaaagcagcaaatg 560

                                                                       
Query: 361 aggtctgatggaactgttccagaatctacagacccttgccatttatctcatcagctcaca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aggtctgatggaactgttccagaatctacagacccttgccatttatctcatcagctcaca 620

                                                                       
Query: 421 gcggacaatgaagggttagtgcggccatctcacaagccaccctgccagcacgttggaagc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcggacaatgaagggttagtgcggccatctcacaagccaccctgccagcacgttggaagc 680

                                                                       
Query: 481 catgaaaacataccactggagcctagaaactcccagaggacacggaccagcacctagagg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 catgaaaacataccactggagcctagaaactcccagaggacacggaccagcacctagagg 740

                                                                       
Query: 541 ggacaggtgttctgcacagaggcccagagaataagggaaggtgctgtcagaagacatttt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ggacaggtgttctgcacagaggcccagagaataagggaaggtgctgtcagaagacatttt 800

                                               
Query: 601 tcaccacgatccttccaactaaagacgaagggaggg 636
           ||||||||||||| ||||||||||||||||||||||
Sbjct: 801 tcaccacgatcctcccaactaaagacgaagggaggg 836


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1036
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1026
Effective search space:   642276
Effective search space used:   642276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)