Query= MSMg01no147_g07.b1 MSMg01no147_g07.b1 CHROMAT_FILE:
MSMg01no147_g07.b1 PHD_FILE: MSMg01no147_g07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:09:58 2005
(396 letters)
>mm_chr1_63575316_63576104
Length = 789
Score = 698 bits (361), Expect = 0.0
Identities = 383/393 (97%), Gaps = 7/393 (1%)
Strand = Plus / Minus
Query: 4 ggaattcagtctccttctcactatctctccttgccacccagtgaacagttttgctgcaca 63
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 589 ggaattcagtctccttctcactatctctccttgccacccagtcaacagttttgctgcaca 530
Query: 64 acacacactcagttcacaatgatgtggttcctcaccactggcccaaagtaatgggatcaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 acacacactcagttcacaatgatgtggttcctcaccactggcccaaagtaatgggatcaa 470
Query: 124 gccatcatggattcaaacctccaaggcttgaatgaaaataatccttttctcttataagtc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 gccatcatggattcaaacctccaaggcttgaatgaaaataatccttttctcttataagtc 410
Query: 184 tattatctcaaggattttgtttcagtaacagaaagctaactaataaactcctacctagcc 243
|||||||||||||||||||||||||||||||||||||| ||| || ||| ||||||
Sbjct: 409 tattatctcaaggattttgtttcagtaacagaaagcta---aat--acacct--ctagcc 357
Query: 244 tttccctcacagcatcaaccaaaatgggtatcactactctatgtaagtatttgtttaatt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 tttccctcacagcatcaaccaaaatgggtatcactactctatgtaagtatttgtttaatt 297
Query: 304 tctgagttttctgcaaagtctaggtgttaaagaagagaggactttagctctctagaacta 363
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 tctgagttttctgcaaaatctaggtgttaaagaagagaggactttagctctctagaacta 237
Query: 364 ctctttatttagtcctcaacatatcactggcat 396
|||||||||||||||||||||||||||||||||
Sbjct: 236 ctctttatttagtcctcaacatatcactggcat 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 396
Length of database: 789
Length adjustment: 9
Effective length of query: 387
Effective length of database: 780
Effective search space: 301860
Effective search space used: 301860
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no147_g07.g1 MSMg01no147_g07.g1 CHROMAT_FILE:
MSMg01no147_g07.g1 PHD_FILE: MSMg01no147_g07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:09:58 2005
(424 letters)
>mm_chr1_63425379_63426201
Length = 823
Score = 789 bits (408), Expect = 0.0
Identities = 420/424 (99%), Gaps = 1/424 (0%)
Strand = Plus / Plus
Query: 1 tctttaaaagttcattcttaagggcatagtttgtcttattgcacatgtgcacaaaactag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctttaaaagttcattcttaagggcatagtttgtcttattgcacatgtgcacaaaactag 260
Query: 61 tgcaggctagatgggctcgtggtccatagctttcggatgtattaaaatgtattgggaata 120
||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 261 tgcaggctagatgggctcgtggtccgtagctttcagatgtattaaaatgtattgggaata 320
Query: 121 tatttgaatagaaagtgcccaagtgagatggccattaggggagaagtttattccattgtc 180
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtttgaatagaaagtgcccaagtgagatggccattaggggagaagtttattccattgtc 380
Query: 181 ttaagcgggatgtatatgcagcttgcagctgcatgcagttgggggttctaggttactaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttaagcgggatgtatatgcagcttgcagctgcatgcagttgggggttctaggttactaac 440
Query: 241 aggctgctagatgcactgttcaaagaggggaaagtatgtgcatcctacgtacaggtaatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggctgctagatgcactgttcaaagaggggaaagtatgtgcatcctacgtacaggtaatg 500
Query: 301 gtctcagactactaaatacattattaaaaggcatgtatatcccaaaccaagtgaagtccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtctcagactactaaatacattattaaaaggcatgtatatcccaaaccaagtgaagtccc 560
Query: 361 aggttgctaagctattttctaggttcggctgcttcaatcttgattctagactcccctgag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 561 aggttgctaagctattttctaggttcggctgcttcaatcttgattctagactccc-tgag 619
Query: 421 tggt 424
||||
Sbjct: 620 tggt 623
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 823
Length adjustment: 9
Effective length of query: 415
Effective length of database: 814
Effective search space: 337810
Effective search space used: 337810
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
