CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTCACCTGAGGAACACCGAATGGCAGAGAAGCACCTGAAAAAATGTT
CAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTC
CATCTCACACCACTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAG
ATGCTGGAGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGG
ATTGCAGGCTTGTACAACCACTCTAGAAATCAGTCTGGCAGTTCCTCAGA
AAATTGGACATAGTACTACCGGAGGATCCAGCAATACCTCTCCTGGGCAT
ATATCCAGAAGATGTCCCAACCGGTAAGAAGGACACATGCTCCACTATGT
TCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGATAGAACCCAGATGC
CCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACACAATGGA
GTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGGCAAAT
GGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACAAAGG
AACTCACACAATATGTACTCACTGATAAGTGGATATTAGCCCAAAACCTA
GGATACCCAAGATATAAGATACAATTTTCTAAACACATGANACTCAAGAA
GAATGAAGACCGAAGTGTGAACACTATGCCCCTCCTTAGAATTGGGAA

ATTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXCCATTCTTTTAAAGATTTCTTGCACATATTGAT
GTTATAGAAATACATTGTATAAAACTTAGAAATCTGTTGTCTAAGAGTGA
CTGAAAAATAACATAAGTAATGTTCTAGAGAACCCACAGGGAGGTACTAA
AATAATCTTAGTTTGGCACTGATTTGGAAGAAAGGACATGAGGGATGACT
TCTGTTTTTTCCTTCAGCATGAGGCTTAAATCCATAAAAGTTAGAATATT
TTCTACTTCAGTTGAAGAACACCTCTATATGACACATGATGTCTCTGTAT
TAAAGCAATGCCCTCTTCTAATTGAAATACGGAAGTCATAGTGTGTAAGA
TTTTGTGGTGAGCAGTGACGAATTGTAATGAAAAGATGTGAGCTTTGGAG
AAACAATAAGAACTAACCGTAATGTTGTGGCTACTGTACCAGGGATTATG
GTGGAATTATGGATTTATTCTACGTTATCCTTATTATATATAATGTTTAT
ATGTATTAGCTTGGGCACATTTACCTATATTATTCCATATGTCAGAACTT
GGATGTGAGAATTTTTCAATGTATCAGCTTGGAAATGAGGAGCTGATTTA
CTTCATTGTTTGTCCATGATAGTTACAATAGCAGGATTCGAGATAGGTCT
TTTAGATAAAATAATTAATGTTTTCTTCTCCCTAATTTAGTTTT

Query= MSMg01no147_j24.g1 MSMg01no147_j24.g1 CHROMAT_FILE:
MSMg01no147_j24.g1 PHD_FILE: MSMg01no147_j24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:15 2005
         (667 letters)



>mm_chr1_4323593_4324660
          Length = 1068

 Score = 1181 bits (611), Expect = 0.0
 Identities = 647/659 (98%), Gaps = 1/659 (0%)
 Strand = Plus / Minus

                                                                       
Query: 8   tttaaagatttcttgcacatattgatgttatagaaatacattgtataaaacttagaaatc 67
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 866 tttaaagatttcttgtacatattgatgttatagaaatacattgtataaaacttagtaatc 807

                                                                       
Query: 68  tgttgtctaagagtgactgaaaaataacataagtaatgttctagagaacccacagggagg 127
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 806 tgttgtctaagagtgactgaaaaataacataagtaatgttctaaagaacccacagggagg 747

                                                                       
Query: 128 tactaaaataatcttagtttggcactgatttggaagaaaggacatgagggatgacttctg 187
           |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 746 tactaaaataatcttagtttggcactgagttgtaagaaaggacatgagggatgacttctg 687

                                                                       
Query: 188 ttttttccttcagcatgaggcttaaatccataaaagttagaatattttctacttcagttg 247
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 ttttttccttcagcatgaggcttaaatccataaaagttagaatattttctacttcagttg 627

                                                                       
Query: 248 aagaacacctctatatgacacatgatgtctctgtattaaagcaatgccctcttctaattg 307
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 aagaacacctctatatgacacatgatgtctctgtattaaagcaatgccctcttctaattg 567

                                                                       
Query: 308 aaatacggaagtcatagtgtgtaagattttgtggtgagcagtgacgaattgtaatgaaaa 367
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 aaatacggaagtcatagtgtgtaagattttgtggtgagcagtgacgaattgtaatgaaaa 507

                                                                       
Query: 368 gatgtgagctttggagaaacaataagaactaaccgtaatgttgtggctactgtaccaggg 427
           |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 506 gatgtgagctttggagaaacaataagaactaaccataatgttgtggctacggtaccaggg 447

                                                                       
Query: 428 attatggtggaattatggatttattctacgttatccttattatatataatgtttatatgt 487
           |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 attacggtgaaattatggatttattctacgttatccttattatatataatgtttatatgt 387

                                                                       
Query: 488 attagcttgggcacatt-tacctatattattccatatgtcagaacttggatgtgagaatt 546
           ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 386 attagcttgggcacattatatctatattattccatatgtcagaacttggatgtgagaatt 327

                                                                       
Query: 547 tttcaatgtatcagcttggaaatgaggagctgatttacttcattgtttgtccatgatagt 606
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 326 tttcaatgtatcagcttggaaatgaggaggtgatttacttcattgtttgtccatgatagt 267

                                                                      
Query: 607 tacaatagcaggattcgagataggtcttttagataaaataattaatgttttcttctccc 665
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tacaatagcaggattcgagataggtcttttagataaaataattaatgttttcttctccc 208


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1068
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1058
Effective search space:   695106
Effective search space used:   695106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)