CAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCACCACATTCTAAAGTTGAATAAGGTTCTAACATTTTCAAATTATAA
GAACTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATT
TATTTAATTTACAGTCCAGCTGTTACCCCTCCATGTTCACCCTCCCAGAG
TTCCTCATCATATTCCTCACCTCCATGCCCCCATCTCCAATAGGATGCTC
CCTGCACCCCACTGCCAACCAGGCCTTCCTTCCCACCCCCTGGGTATTCA
AGTCTCTGGAGAGTTACATGCATCTTCTCTCACTGAGCCCATACCAGGCA
GTCCTCTGTTAGATATGTGTCAGAGGCCAGCTAGGGTATGCTGCCTGTTT
GATGTCGCCACGTCTGAGAGATCTCAGGGATCAATTAGCTAAGACTGTTG
GTCTTCCTATGAGGTTGCCCTCCTCCTCAGCTTCTAACAACATTTTCCTA
ATTAAACCACAGGGTTCCCTGACTTCTGTCCATTGTTTGGGTATAAGTAT
CTGGGTCTGTCTCAATAAGCTGCTTGTTGGGCCTCTCAAAGGACAGCCAT
GCTAGGCTCCTGTCTATAAGCACACCATAGCATCATTAATAGTCACAGGC
CTTGGAGCCTCCCCTTGAGCTGCATCCCAACTTGGGCTGGTCACTGGACC
TCCTTTCCT

NNTCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCACATCTCCTATGACAGGGGAAAG
TATGCAGAGGTCTGGGTCTCAGCCCTGCCTCTTGGCTGAAGATGAAGGCC
AGAAAAGCTCAACTTTCTTTTAATTAGAGGGTAAATTTATTTTGAGTGTT
GTTATGTCTCATGACATTAAGAAAAAAATCAGCAGGTATAAAAAGCAATG
TTAAAGAGATGTAACAAATGAAGTACTTTTAATAAAGGATTTATTTGTGA
AGATTAAGAAGGTCGATATTCTTTTCAGTGTATGAAGGACCTAAAAATCT
TAAATTTTGAGTGTCTGAATCTTATATAAGACTTAAAAGATTGAATTTAG
GGATTCAGTAATTTTGATAAAAATTTTAAAGTCAACGTTCCATGCATCAA
TATAAAATATCTACCCAAATTGATAGAATTATCCTAACATTGATTTGGTT
TTGCTGCTATTTAAATGTCCAAACTTAAGAAAATAAACATATGTCTAATT
AATGCTTATCAAAAATAGGCTGGTTCTTGTCCCACATTTTATTTAAATAT
TGACAGTACTTATTACCTAGTCTGCCTTTCCCATTTCTGTCTCCTGACCA
CAGATTTCCTCACTTTGCTACACTAGTCCAAGCCCAGACTAGTGTATTTA
AAGGAATGAAGAAGAACATTTT

Query= MSMg01no147_l09.g1 MSMg01no147_l09.g1 CHROMAT_FILE:
MSMg01no147_l09.g1 PHD_FILE: MSMg01no147_l09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:22 2005
         (646 letters)



>mm_chr1_7867942_7868987
          Length = 1046

 Score = 1218 bits (630), Expect = 0.0
 Identities = 642/646 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   cacatctcctatgacaggggaaagtatgcagaggtctgggtctcagccctgcctcttggc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacatctcctatgacaggggaaagtatgcagaggtctgggtctcagccctgcctcttggc 260

                                                                       
Query: 61  tgaagatgaaggccagaaaagctcaactttcttttaattagagggtaaatttattttgag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgaagatgaaggccagaaaagctcaactttcttttaattagagggtaaatttattttgag 320

                                                                       
Query: 121 tgttgttatgtctcatgacattaagaaaaaaatcagcaggtataaaaagcaatgttaaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgttgttatgtctcatgacattaagaaaaaaatcagcaggtataaaaagcaatgttaaag 380

                                                                       
Query: 181 agatgtaacaaatgaagtacttttaataaaggatttatttgtgaagattaagaaggtcga 240
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||
Sbjct: 381 agatgtaacaaatgaagtacttttaataaaggatttatttgcgaagattaagaaggtaga 440

                                                                       
Query: 241 tattcttttcagtgtatgaaggacctaaaaatcttaaattttgagtgtctgaatcttata 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tattcttttcagtgtatgaaggacctaaaaatcttaaattttgagtgtctgaatcttata 500

                                                                       
Query: 301 taagacttaaaagattgaatttagggattcagtaattttgataaaaattttaaagtcaac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taagacttaaaagattgaatttagggattcagtaattttgataaaaattttaaagtcaac 560

                                                                       
Query: 361 gttccatgcatcaatataaaatatctacccaaattgatagaattatcctaacattgattt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gttccatgcatcaatataaaatatctacccaaattgatagaattatcctaacattgattt 620

                                                                       
Query: 421 ggttttgctgctatttaaatgtccaaacttaagaaaataaacatatgtctaattaatgct 480
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggttttgctgctatttaaacgtccaaacttaagaaaataaacatatgtctaattaatgct 680

                                                                       
Query: 481 tatcaaaaataggctggttcttgtcccacattttatttaaatattgacagtacttattac 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tatcaaaaataggctggttcttgtcccacattttatttaaatattgacagtacttattac 740

                                                                       
Query: 541 ctagtctgcctttcccatttctgtctcctgaccacagatttcctcactttgctacactag 600
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 741 ctagtctgcctttcccatttctgtctcctgaccacagctttcctcactttgctacactag 800

                                                         
Query: 601 tccaagcccagactagtgtatttaaaggaatgaagaagaacatttt 646
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tccaagcccagactagtgtatttaaaggaatgaagaagaacatttt 846


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1046
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1036
Effective search space:   658896
Effective search space used:   658896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)