Query= MSMg01no148_b21.b1 MSMg01no148_b21.b1 CHROMAT_FILE:
MSMg01no148_b21.b1 PHD_FILE: MSMg01no148_b21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:55 2005
(671 letters)
>mm_chr1_149211865_149212936
Length = 1072
Score = 1263 bits (653), Expect = 0.0
Identities = 665/669 (99%), Gaps = 1/669 (0%)
Strand = Plus / Plus
Query: 4 gaattcattcataatttcctggcttttacaggctttaaaccacctcttttt-aattatct 62
||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 204 gaattcattcataattttttggcttttacaggctttaaaccacctctttttaaattatct 263
Query: 63 ctgaaactacatggaagttgtaaatatgaacttagagtagttatgacagaattcacaagg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctgaaactacatggaagttgtaaatatgaacttagagtagttatgacagaattcacaagg 323
Query: 123 cttgtgcaagcccaagccagatgaaatcacagcatcgagaaagaagactgatttaaaagg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cttgtgcaagcccaagccagatgaaatcacagcatcgagaaagaagactgatttaaaagg 383
Query: 183 tccacctccagcagagaaagtattggctatcaatagttactaggaggatagacactcttc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tccacctccagcagagaaagtattggctatcaatagttactaggaggatagacactcttc 443
Query: 243 tttaaaaggtggcccttttaggtagatcatgatccaatggaagctcaaaacatctgtgaa 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tttaaaaggtggcccttttaggtagatcatgatccaatggaagctcaaaacatctgtgaa 503
Query: 303 tatatcagcagtaaaaattgtgcaaaattctcaaatacttaactgttaaaagaaaaaatt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tatatcagcagtaaaaattgtgcaaaattctcaaatacttaactgttaaaagaaaaaatt 563
Query: 363 gtaaataaacagaaagcatggtctactcaataggagaggtcataaaacaactctttcaat 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gtaaataaacagaaagcatggtctactcaataggagaggtcataaaacaactctttcaat 623
Query: 423 gacaccaaatacaggaaagatataaaaaactccatcttcaagcccatttctacttggatt 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gacaccaaatacaggaaagatataaaaaactccatcttcaagcccatttctacttggatt 683
Query: 483 ggcctttggattcaccctaaacttcagtggaagtctccagcctcagtgggatggatgtgg 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ggcctttggattcaccctaaacttcagtggaagtctccagcctcagtgggatggatgtgg 743
Query: 543 tttttgaagcacattaattctctctgcctctagaacactcagtttaaaagcactgcacag 602
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 744 tttttgaagcacattaattctctctgcctctagaacacttagtttaaaagcactgcacag 803
Query: 603 caacagcccgtaccaaagcacctcagttttaacctcagggtgaggttacttgggttgact 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 caacagcccgtaccaaagcacctcagttttaacctcagggtgaggttacttgggttgact 863
Query: 663 atcagctct 671
|||||||||
Sbjct: 864 atcagctct 872
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 671
Length of database: 1072
Length adjustment: 10
Effective length of query: 661
Effective length of database: 1062
Effective search space: 701982
Effective search space used: 701982
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no148_b21.g1 MSMg01no148_b21.g1 CHROMAT_FILE:
MSMg01no148_b21.g1 PHD_FILE: MSMg01no148_b21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:55 2005
(642 letters)
>mm_chr1_149382951_149383993
Length = 1043
Score = 1141 bits (590), Expect = 0.0
Identities = 629/642 (97%), Gaps = 1/642 (0%)
Strand = Plus / Minus
Query: 1 accttaagtgtttgaatgaaggagaaacctcatagctgtttgcttttaaa-tttttctat 59
|||||||||||||||| ||| |||| |||||||| |||||||||||||| |||||||||
Sbjct: 842 accttaagtgtttgaacgaaatagaatcctcatagttgtttgcttttaaattttttctat 783
Query: 60 gctctcctttataatctacaggcagatatatataatgaagcaattttgtaggtttgaaga 119
|| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 782 gccctcctttataatctacaggcagatatatataatgaagcaattttgtaggtttaaaga 723
Query: 120 atatgaaatgacagttggcactgtgcattttttcatgttgtgttttatccttacagtttt 179
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 atatgaaatgacagttggcgctgtgcattttttcatgttgtgttttatccttacagtttt 663
Query: 180 agcacatataaaaatagtatgttaaacaatagatcacagataagtaaattaaaatgcaga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 agcacatataaaaatagtatgttaaacaatagatcacagataagtaaattaaaatgcaga 603
Query: 240 gggaattcaagtttagatagacaatatttatttttaccacacataaaaaaggaaatgagg 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 602 gggaattcaagtttagatagacaatatttatttttaccacacataaaaaaggaaatgatg 543
Query: 300 tcatagaggaagatgctgggagtataggtgcattaaagagtgcttgcctaatatggacaa 359
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 542 tcatagaggaagatgctgggagtgtaggtgcattaaagagtgcttgcctaatatggacaa 483
Query: 360 gacactgagactgacacacagcacaactaattcaaaaccaacacggctggctgcaataag 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gacactgagactgacacacagcacaactaattcaaaaccaacacggctggctgcaataag 423
Query: 420 attactgtagtagctgagaagattttatttgtaattgtaaaataaatttatttctaagta 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 attactgtagtagctgagaagattttatttgtaattgtaaaataaatttatttctaagta 363
Query: 480 taagtctgtgaaaggactgattcacaaatggcaaggattatttttattttctgtgcatgt 539
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 362 taagtctgtgaaaggactgatgcacaaatggcaaggattatttttattttctgtgcatgt 303
Query: 540 gtcatataaataaaacttaagtgattgcagtgctgttatcttagaaaatactttaagagc 599
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 302 gtcatataaataaaacttaagtgattgcagtgctgttatcttagaaaatactttaagatc 243
Query: 600 ttggtcatctgcaattatattattagtgtaacaaaatcccgc 641
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ttggtcatctgcaattatattattagtgtaacaaaatcccgc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1043
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1033
Effective search space: 652856
Effective search space used: 652856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
