XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTAC
ACAGTTAACAACTGCTTGTGACCTTATACTCTTCTTCATTCTAAATCTAC
AGTTTTCTAGGGTTCTCACCAGAAACCCCCATTTATAGGGAGAATCGTCT
CCTAAATCCCTTGTGCAATCAATCTTTAATTTTTATTTTATCAAAATATA
ATAACACCTAAGGCACCCCAAAACCAACTTGTAATTCCAATTATCTAACA
AGAAGGGAAAAAATAAGCAGAAGGGTAAGAGTCCCCAGAATACAATTGAA
CCATAATCTATTTTCAAATGCTTCCAAAATCCTATATAGAGTTCAAACCA
GGACACTTGAGACCAGACTTTCACAGGGACACACACACACACACACACAC
ACACACACACACACACGCGCGCGCACGCGCGCGCGTGCGCTCTCTCCAAT
GTGTTCATGTTCACTTCTTGGGTGATTTTCTCTCTCAATATTGTAGATAA
CATCTCTTACTCTGCTTCATAATAGTAGCTAAGTCTAAAATTCTTTTTAG
TATTGGAGCCATAAATCATTGTTTACTCTGCATGGAGGTCCCTGACAGAT
TAAGGGAACACCCCAAACTTCTGAATAGCAGCAGTGAGCTATGTCTCTGT
CCCCCACCGCCACAGATACAACTATGTTCCAGGCAGTTCAGAACATCATG
TCTCTTCCCAGCAATAGAGATC

NCCGATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTTTGATCCACTTAGACTTGAGCTTT
GTACATCTTCTGCTTTCCATCTTCTGCTATCTTCTTCAATTTATTGTTAC
TACATTTACAAATTATTGATATTCTTCAAAAGCTTGATATTACATATAAG
ACTTTCACTTGCTTGGCTAGAGCTATTCCATGATAGTTTATATTATTTGA
GGCTGTTTTAAGGGTGTTCTTTCCCTTATTTTATTTTTTAGTCCATTTGT
CATTTATATATAGCAGGGCTACCAAGTTTTTGTGAGTTAGTTTTATATTC
ATCTACTTTGCTGAAAGTTCTTTAGCATCTGTAGGACTTCTCTAGTGGAA
TTTGGGGTCACTTCTGCGCACTATTATAAGGATACTTTGACTTCTTCCTT
TCTAATTTGTATTCTCTTGATATTCTTTAATTGTCTTATTGCTCTAGCTA
AGGCTTCAAGTACTATATTGAATAAATGTGAAGAGAGTGAACAACCTCAT
CTTGTTCCTGATTTTAGTGGAGTTGATTTGAGTTTCTCTCCATTTAATTT
GAAGTTGGCTATAGACTTGCTATAAACTACCTTTATTATGTTTGTATGAA
TTCATAGTCTGCTAAAAGTACAGGCATGATTGTCACTACTGGCTTTTATT
TTGAAGTCTAAATATTGAAGTAGTATA

Query= MSMg01no148_g14.b1 MSMg01no148_g14.b1 CHROMAT_FILE:
MSMg01no148_g14.b1 PHD_FILE: MSMg01no148_g14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:18 2005
         (683 letters)



>mm_chr1_65708199_65709281
          Length = 1083

 Score = 1297 bits (671), Expect = 0.0
 Identities = 678/681 (99%), Gaps = 2/681 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctacacagttaacaactgcttgtgaccttatactcttcttcattctaaatctaca 64
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 gaattctacacagttaaaaactgcttgtgaccttatactcttcttcattctaaatctaca 645

                                                                       
Query: 65  gttttctagggttctcaccagaaacccccatttatagggagaatcgtctcctaaatccct 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 gttttctagggttctcaccagaaacccccatttatagggagaatcgtctcctaaatccct 585

                                                                       
Query: 125 tgtgcaatcaatctttaatttttattttatcaaaatataataacacctaaggcaccccaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 tgtgcaatcaatctttaatttttattttatcaaaatataataacacctaaggcaccccaa 525

                                                                       
Query: 185 aaccaacttgtaattccaattatctaacaagaagggaaaaaataagcagaagggtaagag 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 aaccaacttgtaattccaattatctaacaagaagggaaaaaataagcagaagggtaagag 465

                                                                       
Query: 245 tccccagaatacaattgaaccataatctattttcaaatgcttccaaaatcctatatagag 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 tccccagaatacaattgaaccataatctattttcaaatgcttccaaaatcctatatagag 405

                                                                       
Query: 305 ttcaaaccaggacacttgagaccagactttcacagggacacacacacacacacacacaca 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 ttcaaaccaggacacttgagaccagactttcacagggacacacacacacacacacacaca 345

                                                                       
Query: 365 cacacacacacacac--gcgcgcgcacgcgcgcgcgtgcgctctctccaatgtgttcatg 422
           |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 cacacacacacacacacgcgcgcgcacgcgcgcgcgtgcgctctctccaatgtgttcatg 285

                                                                       
Query: 423 ttcacttcttgggtgattttctctctcaatattgtagataacatctcttactctgcttca 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 ttcacttcttgggtgattttctctctcaatattgtagataacatctcttactctgcttca 225

                                                                       
Query: 483 taatagtagctaagtctaaaattctttttagtattggagccataaatcattgtttactct 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 taatagtagctaagtctaaaattctttttagtattggagccataaatcattgtttactct 165

                                                                       
Query: 543 gcatggaggtccctgacagattaagggaacaccccaaacttctgaatagcagcagtgagc 602
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 gcatggaggtccctgacagattaagggaacaccccaaacttctgaatagcagcagtgagc 105

                                                                       
Query: 603 tatgtctctgtcccccaccgccacagatacaactatgttccaggcagttcagaacatcat 662
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 tatgtctctgtcccccaccgccacagatacaactatgttccaggcagttcagaacatcat 45

                                
Query: 663 gtctcttcccagcaatagaga 683
           |||||||||||||||||||||
Sbjct: 44  gtctcttcccagcaatagaga 24


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 63
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 683
Length of database: 1083
Length adjustment: 10
Effective length of query: 673
Effective length of database: 1073
Effective search space:   722129
Effective search space used:   722129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)