Query= MSMg01no149_e04.b1 MSMg01no149_e04.b1 CHROMAT_FILE:
MSMg01no149_e04.b1 PHD_FILE: MSMg01no149_e04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:28 2005
(495 letters)
>mm_chr1_45701007_45701902
Length = 896
Score = 884 bits (457), Expect = 0.0
Identities = 484/493 (98%), Gaps = 1/493 (0%)
Strand = Plus / Minus
Query: 4 ggaattctctgga-tgcccagggaggggtgacccagcgaagttactgtgatcaggaattc 62
||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 696 ggaattctctggacagcacagggaggggtgacccagcgaagttactgtgatcaggatttc 637
Query: 63 tgtgcacaaaccaatggtaaggaatgcagtaggaacaacaaatattccttaaggtgttgg 122
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 636 tgtgcacaaaccaatggtaaggaatgcagtaggaacagcaaatattccttaaggtgttgg 577
Query: 123 cttatcctaggggtcaagaaatcttcatgaaggcctgttgcatacaatatttctcaatat 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 cttatcctaggggtcaagaaatcttcatgaaggcctgttgcatacaatatttctcaatat 517
Query: 183 gaaaaaacctaaggtaaaaagagctctaaactaaaatagaaaaagaaaaaccaaagatcc 242
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 gaaaaaacataaggtaaaaagagctctaaactaaaatagaaaaagaaaaaccaaagatcc 457
Query: 243 actggctggaccagatgctgcatcagcacttttaatgtgatcctcctaccataactaagg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 actggctggaccagatgctgcatcagcacttttaatgtgatcctcctaccataactaagg 397
Query: 303 atagattgaacatgtgagctctccacacatacatttgactgccagttttctctctctgag 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 atagattgaacatgtgagctctccacacatacatttgactgccagttttctctctctgag 337
Query: 363 catgtgcttctccttttcttccttcaccatgcaactccttcagaaaacttgaaaaacctt 422
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 336 catgtgcttctccttttcttccttcaccatgcaactccttcagagaacttgaaaaacctt 277
Query: 423 ggatctggtatgcgggaagagacaagggtagtctcttggtatggataagtctgccagcct 482
||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 ggatctggtctgcgtgaagagacaagggtagtctcttggtatggataagtctgccagcct 217
Query: 483 taaatgatgctat 495
|||||||||||||
Sbjct: 216 taaatgatgctat 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 896
Length adjustment: 10
Effective length of query: 485
Effective length of database: 886
Effective search space: 429710
Effective search space used: 429710
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no149_e04.g1 MSMg01no149_e04.g1 CHROMAT_FILE:
MSMg01no149_e04.g1 PHD_FILE: MSMg01no149_e04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:28 2005
(426 letters)
>mm_chr1_45545705_45546530
Length = 826
Score = 717 bits (371), Expect = 0.0
Identities = 413/427 (96%), Gaps = 2/427 (0%)
Strand = Plus / Plus
Query: 1 attgcaggctttgttgattagggagcaaatcccagtgccataggccagtaacctgaggca 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 attgcaggctttgttgattagggagcaaatcccagtgccataggccaataacctgaggca 260
Query: 61 tgtctgtctgatctggcaaccttagggctataaccagaagaactttgaattttcactttt 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 261 tgtctgtctgatctggcaaccttagggctataaccacaagaactttgaattttcactttt 320
Query: 121 tattaaaatagaattgaggtggttgtaatgttctaattg-ctaatattctgtggacaaat 179
|||||||||||||||||||||||||||||| |||||||| | |||||||||| |||||||
Sbjct: 321 tattaaaatagaattgaggtggttgtaatgctctaattggc-aatattctgttgacaaat 379
Query: 180 ataggacatctatgacaactgaagttcaccttctagaggtgagctccagagtccaatcaa 239
|||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 380 ataggacatctatgacaactgaagtttaccttctagaggtgagctcaagagtccaatcaa 439
Query: 240 gacaataaattttggctttttgttttgtgtttgtttgtttgattttgtttttgttgctac 299
|||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||
Sbjct: 440 gacaataaattttggctttttgatttatgtttgtttgtttgattttgtttttgttgttac 499
Query: 300 cacaaacactttgacagcacattctagtggccagagaacattggggaaaatgtctcaaag 359
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 500 cacaaacactttgacagcacattctagtggccagagaagattggggaaaatgtctcaaag 559
Query: 360 acaaattgccatataaaacagtcatattacatgaaaaacaattactctgtacactaggag 419
|||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 560 acaaattgccatataaaaaagtcatattacatgaaaaacaattgctctgtacactaggag 619
Query: 420 agcatgt 426
|||||||
Sbjct: 620 agcatgt 626
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 826
Length adjustment: 9
Effective length of query: 417
Effective length of database: 817
Effective search space: 340689
Effective search space used: 340689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
