Query= MSMg01no149_e12.b1 MSMg01no149_e12.b1 CHROMAT_FILE:
MSMg01no149_e12.b1 PHD_FILE: MSMg01no149_e12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:29 2005
(505 letters)
>mm_chr1_178243572_178244476
Length = 905
Score = 601 bits (311), Expect = e-176
Identities = 323/327 (98%)
Strand = Plus / Minus
Query: 1 aaatttatttgctaggcccaaagaaaaatatgattatcattgtcccatgtttttcttttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 aaatttatttgctaggcccaaagaaaaatatgattatcattgtcccatgtttttcttttg 268
Query: 61 gttaccataggaacaaagaactttcatatcattcacactgaaaccagagcatcttccagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 267 gttaccataggaacaaagaactttcatatcattcacactgaaaccagagcaacttccagg 208
Query: 121 gcctcgtttttctttttaatacactccagttaggctttctttcattcagggtactcaggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gcctcgtttttctttttaatacactccagttaggctttctttcattcagggtactcaggt 148
Query: 181 gaagcatcctttgttaaagtcaacaatgatttttatgttactaaatctagtggctaataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 gaagcatcctttgttaaagtcaacaatgatttttatgttactaaatctagtggctaataa 88
Query: 241 tttgttttctgattctatctgaccatataacacaactgatcagatttttcttcagatgtt 300
|| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 ttagtcttctgattctatctgaccatataacacaactgatcagatttttcttcagatgtt 28
Query: 301 gtcactgtgcttcacatggatcttaaa 327
||||||||||||||||||| |||||||
Sbjct: 27 gtcactgtgcttcacatggctcttaaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 905
Length adjustment: 10
Effective length of query: 495
Effective length of database: 895
Effective search space: 443025
Effective search space used: 443025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no149_e12.g1 MSMg01no149_e12.g1 CHROMAT_FILE:
MSMg01no149_e12.g1 PHD_FILE: MSMg01no149_e12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:29 2005
(557 letters)
>mm_chr1_178112112_178113068
Length = 957
Score = 1048 bits (542), Expect = 0.0
Identities = 554/558 (99%), Gaps = 1/558 (0%)
Strand = Plus / Plus
Query: 1 tttctcttttagacataagaactaggaaacacttggcagagggctgaacctggtttacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 tttctcttttagacataagaactaggaaacacttggcagagggctgaacctggtttacct 259
Query: 61 gtggaggttcactgggtaaagacccagttggttagcagaagaatgggcaatctaacgatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gtggaggttcactgggtaaagacccagttggttagcagaagaatgggcaatctaacgatt 319
Query: 121 tctattctaaagactctgagggcagaaacaggatgttgttgtctctgtttagggggcaaa 180
|||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 320 tctattctaaagactctgagggcagacacaggatgttgctgtctctgtttagggggcaaa 379
Query: 181 cagaaaaaaa-tgttaaggtaggacatcccactagaagttgtaaaaaagttattaaaatt 239
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cagaaaaaaaatgttaaggtaggacatcccactagaagttgtaaaaaagttattaaaatt 439
Query: 240 tgaatatggtttgaaaacatctgtatttatagacaaggacctaaagtccaagagcagaga 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tgaatatggtttgaaaacatctgtatttatagacaaggacctaaagtccaagagcagaga 499
Query: 300 tcagagtcaaatggagctctgaagtttttgaccttaacaactgaaagaagaaggtttcca 359
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tcagagtcaactggagctctgaagtttttgaccttaacaactgaaagaagaaggtttcca 559
Query: 360 ctgatgagaaacaatgcagtttaacctcattgcagggtaaaaagcaaagggcttggtaaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ctgatgagaaacaatgcagtttaacctcattgcagggtaaaaagcaaagggcttggtaaa 619
Query: 420 gtcaagtggccattggacagacacagcgagcatccaccaggaatgagcaagccatgggaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gtcaagtggccattggacagacacagcgagcatccaccaggaatgagcaagccatgggaa 679
Query: 480 tgaagttgaagggcaatggtatttagagagactagttggtgagatcaagagaagtacact 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tgaagttgaagggcaatggtatttagagagactagttggtgagatcaagagaagtacact 739
Query: 540 ggtgatagagagatggct 557
||||||||||||||||||
Sbjct: 740 ggtgatagagagatggct 757
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 557
Length of database: 957
Length adjustment: 10
Effective length of query: 547
Effective length of database: 947
Effective search space: 518009
Effective search space used: 518009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
