Query= MSMg01no149_g03.b1 MSMg01no149_g03.b1 CHROMAT_FILE:
MSMg01no149_g03.b1 PHD_FILE: MSMg01no149_g03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:38 2005
(459 letters)
>mm_chr1_164696320_164697178
Length = 859
Score = 810 bits (419), Expect = 0.0
Identities = 449/459 (97%), Gaps = 2/459 (0%)
Strand = Plus / Plus
Query: 1 ggatgctgctgcctggcttctcttttgagaagcacaagctaagctcagcacttctgtgca 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 ggatgctgctgcctggcttctcttttgagaagcacaagctcagctcagcacttctgtgca 260
Query: 61 tctgcggatgctcctgttgcaaactcagtctgtgtcaagagtcgaaattgactccaggat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctgcggatgctcctgttgcaaactcagtctgtgtcaagagtcgaaattgactccaggat 320
Query: 121 tcaacataaactgacttgtaaaatttccagaagtcatcagttaacctgaactcacctctt 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 321 tcaacataaactgacttgtaaaatttccagaagtcatcagctaacctgaactcacctctt 380
Query: 181 gcaaaggtcttggatgtgtttccaggaagtaccgtgaggcctccaaggaacaaacttgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 381 gcaaaggtcttggatgtgtttccaggaagtaccgtgaggcctccaaggaacaaccttgat 440
Query: 241 gacgtaaacaaactgcagc-agttacctttgaggcaattcattagggaactacagcttct 299
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gacgtaaacaaactgcagcca-ttacctttgaggcaattcattagggaactacagcttct 499
Query: 300 tttccagaaggtaatggggctaagagctggggaagggagctttgtgccgaacagtaatgc 359
||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||
Sbjct: 500 tttccagaaggtaatggggttgagagctggggaagggagctttgtggtgaacagtaatgc 559
Query: 360 tcttctagaggaagcagaaagagaaaattgtgtggcttgttggtggtgcttagcaaatgt 419
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 560 tcttctagaggaagcagaaagagaaaattgtgtggcttgttggtggtgcttaacaaatgt 619
Query: 420 ctttgtctgcatcaggagccaagtcggaacagtgttact 458
|||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ctttgtctgcatcaggagccaagtcggaacagtgttact 658
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 859
Length adjustment: 10
Effective length of query: 449
Effective length of database: 849
Effective search space: 381201
Effective search space used: 381201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no149_g03.g1 MSMg01no149_g03.g1 CHROMAT_FILE:
MSMg01no149_g03.g1 PHD_FILE: MSMg01no149_g03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:38 2005
(510 letters)
>mm_chr1_164872812_164873720
Length = 909
Score = 888 bits (459), Expect = 0.0
Identities = 498/511 (97%), Gaps = 3/511 (0%)
Strand = Plus / Minus
Query: 1 taagatgaagacatctgtcaggcagagcacctgaagat-gggggagggggaaagagactc 59
|||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 709 taagatgaagacatctgtcaggcagagcacctgaagatggggggagtgggaaagagactc 650
Query: 60 acacttaacaaggacacagattagaaagactgaaaactaaagggcttagagggaacttgc 119
||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 aca-ttaacaagggcacagattagaaagactgaaaactaaagggcttagagggaacttgc 591
Query: 120 agagccggtgcccagattctgaggagagcaccaggtgtttttggctagtgtctctgaggc 179
||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 590 agagctggtgcccagattctgaggagagcgccaggtgtttttggctagtgtctctgaggc 531
Query: 180 aacatgaagagacaggttctatgggttgggtacaactgtgactataacttaactataact 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 aacatgaagagacaggttctatgggttgggtacaactgtgactataacttaactataact 471
Query: 240 aaagcatcagcaagatagtaaagatgactacatttatggcagaaatgttaatagaacctg 299
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 470 aaagcatcagcaagatagtaaagatgactatatttatggcagaaatgttaatagaacctg 411
Query: 300 gaaggagtagcttccttcgcttccagcctttgagatgcccccagacaaggagcaagctgg 359
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 410 gaaggagtagcttccttcgcttccagcctttgagatgtccccagacaaggagcaagctgg 351
Query: 360 caaataaaaataagtacctgccatgtggatacccggaacacaacttgggtcatgaggcta 419
|||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 350 caaataaaaataagtatctgccatgtggataccagaaacacaacttgggtcatgaggcta 291
Query: 420 ggtgacaagagctgctgatacacacaggcacaaaagatctcagaaagttgctagaaaact 479
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 290 ggtgacaagagctgctgatacacacaggcacaaaagatctcagaaaggtgctagaaaact 231
Query: 480 gctctattcacaatagccttgatattaaact 510
|||||||||||||||||| ||||||||||||
Sbjct: 230 gctctattcacaatagcc-tgatattaaact 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 510
Length of database: 909
Length adjustment: 10
Effective length of query: 500
Effective length of database: 899
Effective search space: 449500
Effective search space used: 449500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
