Query= MSMg01no150_g08.b1 MSMg01no150_g08.b1 CHROMAT_FILE:
MSMg01no150_g08.b1 PHD_FILE: MSMg01no150_g08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:13:56 2005
(343 letters)
>mm_chr1_63098303_63099045
Length = 743
Score = 611 bits (316), Expect = e-179
Identities = 334/340 (98%)
Strand = Plus / Plus
Query: 1 aaaacattcctgaatgagacactaagaacatctagatttattaatttctctattttacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaacattcctgaatgagacactaagaacatctagatttattaatttctctattttacct 260
Query: 61 ctcaacttacagaataaactgtaaattaaagaataaatccataggaaacaaaagaggtct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcaacttacagaataaactgtaaattaaagaataaatccataggaaacaaaagaggtct 320
Query: 121 taagaaacgtaagtttacaaattccagccacagtagcggggttttacttgatctatttgc 180
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 321 taagaaacgtaagtttacaaattccagccacagtagtggggttttacttgatctatttgc 380
Query: 181 ttctatttaccctgtaactacgtgtctagccatcttaagcgtaaaccacagatcatgtgc 240
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 381 ttctatttaccctgtaactacgtgtctagccatcttaagtgtaaaccacagatcatgtgc 440
Query: 241 taaagaacttgatcctcaacagctctatgaacaataataaacggtctacggctgttctac 300
|||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 441 taaagaacatgatcctcaacagctctatgaacaataataaacggtctaagggtgttctac 500
Query: 301 attttgaggccccaggttattcttttctttatatatctgc 340
|||||||||||||||||||| |||||||||||||||||||
Sbjct: 501 attttgaggccccaggttatccttttctttatatatctgc 540
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space: 245156
Effective search space used: 245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no150_g08.g1 MSMg01no150_g08.g1 CHROMAT_FILE:
MSMg01no150_g08.g1 PHD_FILE: MSMg01no150_g08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:13:56 2005
(344 letters)
>mm_chr1_63216392_63217135
Length = 744
Score = 648 bits (335), Expect = 0.0
Identities = 341/343 (99%), Gaps = 1/343 (0%)
Strand = Plus / Minus
Query: 1 aatttattttatttgtttttttaccctattgttttgatggccagttcgcacaactggcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 aatttattttatttgtttttttaccctattgttttgatggccagttcgcacaactggcac 309
Query: 61 agcagcaagtaacttgattgaagtatttgttgatggtcagtctgtcatggtggaaccagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 agcagcaagtaacttgattgaagtatttgttgatggtcagtctgtcatggtggaaccagg 249
Query: 121 aaccactgttctgcaggtaattacttttatgactctgtgagttttctgatttttatttta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 aaccactgttctgcaggtaattacttttatgactctgtgagttttctgatttttatttta 189
Query: 181 aaaaattatttccttcatactgtttagtttcaatatagcaatgtgtcctgcaaggcaggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 aaaaattatttccttcatactgtttagtttcaatatagcaatgtgtcctgcaaggcaggc 129
Query: 241 aagtgaagg-tagtacacagtttctctaagtttctccagaagtaaccaatttgctcatag 299
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 aagtgaaggacagtacacagtttctctaagtttctccagaagtaaccaatttgctcatag 69
Query: 300 acagacgctgctgtatgactgtgggttatcacagacctaaact 342
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 acagacgctgctgtatgactgtgggttatcacagacctaaact 26
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|