Query= MSMg01no150_g13.b1 MSMg01no150_g13.b1 CHROMAT_FILE:
MSMg01no150_g13.b1 PHD_FILE: MSMg01no150_g13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:13:57 2005
(310 letters)
>mm_chr1_191783929_191784633
Length = 705
Score = 522 bits (270), Expect = e-153
Identities = 298/312 (95%), Gaps = 13/312 (4%)
Strand = Plus / Plus
Query: 2 gaattcacaatgcctc-tgccttctcttcagagtgttgaaattacaggcatgagtcatcc 60
||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 204 gaattcacaatgc-tcctgccttctcttcag--tgttgaaattacaggcatgagtcatcc 260
Query: 61 tgcccaactatttttctttatttatgatttttgcatcaactacagaccttcacatttcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcccaactatttttctttatttatgatttttgcatcaactacagaccttcacatttcct 320
Query: 121 agactctgaagttaagagagtctgtattttaaattgtctgagttcacacctccagcttaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agactctgaagttaagagagtctgtattttaaattgtctgagttcacacctccagcttaa 380
Query: 181 agcaagaacgtaggagtaacttggtcttgcagatggcttttcaagggaacaggctgcctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agcaagaacgtaggagtaacttggtcttgcagatggcttttcaagggaacaggctgcctc 440
Query: 241 tgcaactcctgtggattcccccccccaacacccccccccc--agccctgcttagcactgg 298
|||||||||||||||||||||||| ||| |||||| |||| |||||||||||||
Sbjct: 441 tgcaactcctgtggattccccccc--aac-----ccccccggagccatgcttagcactgg 493
Query: 299 gcaggtgttggg 310
||||||||||||
Sbjct: 494 gcaggtgttggg 505
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 310
Length of database: 705
Length adjustment: 9
Effective length of query: 301
Effective length of database: 696
Effective search space: 209496
Effective search space used: 209496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no150_g13.g1 MSMg01no150_g13.g1 CHROMAT_FILE:
MSMg01no150_g13.g1 PHD_FILE: MSMg01no150_g13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:13:57 2005
(105 letters)
>mm_chr1_191904391_191904895
Length = 505
Score = 195 bits (101), Expect = 5e-55
Identities = 104/105 (99%)
Strand = Plus / Minus
Query: 1 gggaggcaagcgcccacccacatcaaggaaagcccaggcctacgcattgcaagtgcctcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 gggaggcaagcgcccacccacatcaaggaaagcccaggcctacgcattgcaagtgcctcg 246
Query: 61 aaggaaagaaggcctaagaaaaccctggcagaggcttgaagcctg 105
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 caggaaagaaggcctaagaaaaccctggcagaggcttgaagcctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 105
Length of database: 505
Length adjustment: 8
Effective length of query: 97
Effective length of database: 497
Effective search space: 48209
Effective search space used: 48209
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
|
