Query= MSMg01no150_l22.b1 MSMg01no150_l22.b1 CHROMAT_FILE:
MSMg01no150_l22.b1 PHD_FILE: MSMg01no150_l22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:23 2005
(144 letters)
>mm_chr1_152844090_152844633
Length = 544
Score = 250 bits (129), Expect = 4e-71
Identities = 138/141 (97%)
Strand = Plus / Minus
Query: 1 gctatctgaactgaggagacggacctgagagtccagcttttgctagattgtgtaggagac 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 gctatctgaactgaggagatggacctgagagtccagcttttgctagattgtgtaggagac 282
Query: 61 aacactagaaggagctatgtagatagaaagcttcttaggtttgcagagagccagtatgtc 120
||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 281 aacactaaaaggagctatgtagatagagagcttcttaggtttgcagagagccagtatgtc 222
Query: 121 tatgtcaggaaaacgctcagg 141
|||||||||||||||||||||
Sbjct: 221 tatgtcaggaaaacgctcagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 3
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 144
Length of database: 544
Length adjustment: 8
Effective length of query: 136
Effective length of database: 536
Effective search space: 72896
Effective search space used: 72896
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no150_l22.g1 MSMg01no150_l22.g1 CHROMAT_FILE:
MSMg01no150_l22.g1 PHD_FILE: MSMg01no150_l22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:23 2005
(238 letters)
>mm_chr1_152710890_152711525
Length = 636
Score = 364 bits (188), Expect = e-105
Identities = 224/236 (94%), Gaps = 2/236 (0%)
Strand = Plus / Plus
Query: 1 ctgaaagccccaaggaactggtacagaccaacgtaggccctgcagtttgctgctctggtc 60
||||||||||||| |||||||| ||||||| | |||||||||||||||||||||||||||
Sbjct: 201 ctgaaagccccaaagaactggtgcagaccagcataggccctgcagtttgctgctctggtc 260
Query: 61 tctctgtctttttgagttcgtgtgagccctgctcagggaaactatttcattgtacatacg 120
|||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 261 tctccgtctttttaagttcgtgtgagccctgctcagggaaattatttcattgtacatacg 320
Query: 121 gttttcttaaaggaaaaaaaaatgaggtttttcctttttccaaaagaaattgatgtaaaa 180
||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||
Sbjct: 321 gttttcttaaaggaaaaaaaa-tgag-tttttcctttttccaaaataaattgatgtaaaa 378
Query: 181 tccatactaaggctctctctggcaccttaatttggtgtcctaacaattttaaataa 236
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tccatactaaacctctctctggcaccttaatttggtgtcctaacaattttaaataa 434
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 636
Length adjustment: 9
Effective length of query: 229
Effective length of database: 627
Effective search space: 143583
Effective search space used: 143583
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
